RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SLC44A4Q53GD3 710 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 MS4A13Q5J8X5 152 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 PIK3R6Q5UE93 754 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 RAP1GAP2Q684P5 730 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 RFWD3Q6PCD5 774 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 SLFN11Q7Z7L1 901 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 ARFGAP1Q8N6T3 406 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 CCDC185Q8N715 623 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 ZNF830Q96NB3 372 aaPredicted RBP25.35■■□□□ 1.65
HOXC9-201ENST00000303450 HAPLN3Q96S86 360 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 TMPRSS4Q9NRS4 437 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 WNT16Q9UBV4 365 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 PCSK1NQ9UHG2 260 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 HS3ST4Q9Y661 456 aa25.35■■□□□ 1.65
HOXC9-201ENST00000303450 BDP1A6H8Y1 2624 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 TMEM110-MUSTN1A8MSY1 372 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 I6L893 689 aaPredicted RBP25.34■■□□□ 1.65
HOXC9-201ENST00000303450 PRPSAP2O60256 369 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 TACR2P21452 398 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 MIPP30301 263 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 PCK1P35558 622 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 GAD2Q05329 585 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 ACBD5Q5T8D3 534 aaPredicted RBP25.34■■□□□ 1.65
HOXC9-201ENST00000303450 DAB2IPQ5VWQ8 1189 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 BHMTQ93088 406 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 NTAN1Q96AB6 310 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 TMA16Q96EY4 203 aaKnown RBP25.34■■□□□ 1.65
HOXC9-201ENST00000303450 BBS2Q9BXC9 721 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 CA14Q9ULX7 337 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 PIAS3Q9Y6X2 628 aa25.34■■□□□ 1.65
HOXC9-201ENST00000303450 BTNL10A8MVZ5 291 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 F5H5T6 163 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 CCDC175P0C221 793 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 GJA4P35212 333 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 SSR1P43307 286 aaKnown RBP25.33■■□□□ 1.65
HOXC9-201ENST00000303450 AIF1P55008 147 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 HADHBP55084 474 aaKnown RBP25.33■■□□□ 1.65
HOXC9-201ENST00000303450 MLLT6P55198 1093 aaPredicted RBP25.33■■□□□ 1.65
HOXC9-201ENST00000303450 NAP1L1P55209 391 aaKnown RBP25.33■■□□□ 1.65
HOXC9-201ENST00000303450 AMPD2Q01433 879 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 MPPE1Q53F39 396 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 LGI2Q8N0V4 545 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 DDI1Q8WTU0 396 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 KCNF1Q9H3M0 494 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 C8orf33Q9H7E9 229 aaPredicted RBP25.33■■□□□ 1.65
HOXC9-201ENST00000303450 MARK1Q9P0L2 795 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 USP18Q9UMW8 372 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 DUSP10Q9Y6W6 482 aa25.33■■□□□ 1.65
HOXC9-201ENST00000303450 TYW5A2RUC4 315 aaKnown RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 NEDD8-MDP1E9PL57 170 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 ALADP13716 330 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 GLULP15104 373 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 SOX9P48436 509 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 AUHQ13825 339 aaKnown RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 EFHC2Q5JST6 749 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 IER5LQ5T953 404 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 EDAQ92838 391 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 C1orf74Q96LT6 269 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 PRMT1Q99873 361 aaKnown RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 IRX2Q9BZI1 471 aaPredicted RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 ARHGEF3Q9NR81 526 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 COL4A2P08572 1712 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 HOXC11O43248 304 aaPredicted RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 BUB1O43683 1085 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 TYRP14679 529 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 MAN1A1P33908 653 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 GGCXP38435 758 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 SCAPQ12770 1279 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 MLF2Q15773 248 aaPredicted RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 RALGPS2Q86X27 583 aaPredicted RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 CALR3Q96L12 384 aaKnown RBP25.32■■□□□ 1.64
HOXC9-201ENST00000303450 PLK2Q9NYY3 685 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 SALL4Q9UJQ4 1053 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 VANGL2Q9ULK5 521 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 FZD10Q9ULW2 581 aa25.32■■□□□ 1.64
HOXC9-201ENST00000303450 SPECC1L-ADORA2AF8WAN1 911 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 GFRA2O00451 464 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 FYB2Q5VWT5 728 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 FBXL22Q6P050 247 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 LRRC31Q6UY01 552 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 HJURPQ8NCD3 748 aaPredicted RBP25.31■■□□□ 1.64
HOXC9-201ENST00000303450 PEBP4Q96S96 227 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 TSGA10Q9BZW7 698 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 OSBPL2Q9H1P3 480 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 OR12D3Q9UGF7 316 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 SNX10Q9Y5X0 201 aa25.31■■□□□ 1.64
HOXC9-201ENST00000303450 F5P12259 2224 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 A0A0U1RQJ8 604 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 PENKP01210 267 aaPredicted RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 CTHP32929 405 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 PRKCQQ04759 706 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 SIGLEC14Q08ET2 396 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 HADHQ16836 314 aaKnown RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 RABGAP1LQ5R372 815 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 ERMARDQ5T6L9 678 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 TPRG1Q6ZUI0 275 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 SIX5Q8N196 739 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 NAT16Q8N8M0 369 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 ATRIPQ8WXE1 791 aa25.3■■□□□ 1.64
HOXC9-201ENST00000303450 MSANTD3Q96H12 275 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms