RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SCML2Q9UQR0 700 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 MTMR11A4FU01 709 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 ERICH4A6NGS2 130 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 CHADO15335 359 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 MSI1O43347 362 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 AGTP01019 485 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 RFC2P35250 354 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 PPP2R2AP63151 447 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 DUSP4Q13115 394 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 MRPL58Q14197 206 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 BRMS1LQ5PSV4 323 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TMEM173Q86WV6 379 aaPredicted RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 RELL1Q8IUW5 271 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TTC9BQ8N6N2 239 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 ATP11CQ8NB49 1132 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 SNX10Q9Y5X0 201 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 SARNPP82979 210 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 FASTKD3Q14CZ7 662 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 PSMD5Q16401 504 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 SERPINB12Q96P63 405 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 PRDM12Q9H4Q4 367 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 GMIPQ9P107 970 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TBK1Q9UHD2 729 aa14.97□□□□□ -0.01
SHCBP1-201ENST00000303383 TCRBV7S3A2A0A539 114 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 POC1B-GALNT4F8VUJ3 575 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 ALOX15BO15296 676 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 EIF3HO15372 352 aaKnown RBP eCLIP14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 BANF1O75531 89 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 TMEM63AO94886 807 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 MX2P20592 715 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 TAF12Q16514 161 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 C1orf53Q5VUE5 145 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 FBXO22Q8NEZ5 403 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 CASP10Q92851 521 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 RTP4Q96DX8 246 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 SMOC2Q9H3U7 446 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 NMUR1Q9HB89 426 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 ETNK1Q9HBU6 452 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 TLR8Q9NR97 1041 aaKnown RBP14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 PSEN1P49768 467 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 DPYSQ14117 519 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 BTG3Q14201 252 aaPredicted RBP14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 TAS1R1Q7RTX1 841 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 SCD5Q86SK9 330 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 FBXO36Q8NEA4 188 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 SLC12A6Q9UHW9 1150 aa14.96□□□□□ -0.01
SHCBP1-201ENST00000303383 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 F5H423 210 aaPredicted RBP14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 LRIG2O94898 1065 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 APOEP02649 317 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 GJA8P48165 433 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 HCAR3P49019 387 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 GAD2Q05329 585 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 EFEMP1Q12805 493 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 PAFAH1B3Q15102 231 aaKnown RBP14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 ANKLE1Q8NAG6 615 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 GIPC2Q8TF65 315 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 FRMD8Q9BZ67 464 aaPredicted RBP14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 LRRC4CQ9HCJ2 640 aa14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 KLHL8Q9P2G9 620 aaPredicted RBP14.96□□□□□ -0.02
SHCBP1-201ENST00000303383 NCAM2O15394 837 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 GCATO75600 419 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ZNF189O75820 626 aaPredicted RBP14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ABHD2P08910 425 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 OR1D2P34982 312 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 CA8P35219 290 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 FNBP1LQ5T0N5 605 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 C2orf15Q8WU43 125 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ZNF558Q96NG5 402 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ANLNQ9NQW6 1124 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 CHMP2BQ9UQN3 213 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 A0A0A0MRY4 1105 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 C5orf60A6NFR6 353 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 RNF103O00237 685 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 CDH16O75309 829 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 DGKIO75912 1065 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 SLC2A3P11169 496 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 AUHQ13825 339 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ANKRD20A2Q5SQ80 823 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 C10orf120Q5SQS8 335 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ANKRD20A1Q5TYW2 823 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 ANKRD20A3Q5VUR7 823 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 PID1Q7Z2X4 250 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 NECAB2Q7Z6G3 386 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 P2RY11Q96G91 374 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 SPATA13Q96N96 652 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 NACA2Q9H009 215 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 PTPRDP23468 1912 aa14.95□□□□□ -0.02
SHCBP1-201ENST00000303383 DCLK1O15075 740 aa14.94□□□□□ -0.02
SHCBP1-201ENST00000303383 PAGE1O75459 146 aa14.94□□□□□ -0.02
SHCBP1-201ENST00000303383 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
SHCBP1-201ENST00000303383 USP46P62068 366 aa14.94□□□□□ -0.02
SHCBP1-201ENST00000303383 SKOR1P84550 965 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms