RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RDH11Q8TC12 318 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FAM172AQ8WUF8 416 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SLC39A8Q9C0K1 460 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GPAMQ9HCL2 828 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PSMB9P28065 219 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 NEK3P51956 506 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ANKS6Q68DC2 871 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GLB1LQ6UWU2 654 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 KIAA0408Q6ZU52 694 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PACS2Q86VP3 889 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZDHHC13Q8IUH4 622 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PIK3R5Q8WYR1 880 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PCDHGC5Q9Y5F6 944 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PIPSLA2A3N6 862 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FAM47E-STBD1D6RA91 191 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 PRRG1O14668 218 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 SGPL1O95470 568 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 NPR3P17342 541 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 CYP2F1P24903 491 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 RPS7P62081 194 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 GNA13Q14344 377 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF605Q86T29 641 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 STK40Q8N2I9 435 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 WDR36Q8NI36 951 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 BLOC1S5Q8TDH9 187 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 ACMSDQ8TDX5 336 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 MCRS1Q96EZ8 462 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 FAM118BQ9BPY3 351 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 EHD4Q9H223 541 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 IARS2Q9NSE4 1012 aaKnown RBP7.82□□□□□ -1.16
SF3B3-201ENST00000302516 DDIT4Q9NX09 232 aa7.82□□□□□ -1.16
SF3B3-201ENST00000302516 CEMIPQ8WUJ3 1361 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 UNC5CO95185 931 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ITGB3P05106 788 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CD44P16070 742 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SPIRE1Q08AE8 756 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PLD1Q13393 1074 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 C2CD6Q53TS8 623 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SYNE4Q8N205 404 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TSPAN14Q8NG11 270 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GPR101Q96P66 508 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 COPS7BQ9H9Q2 264 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 STOML2Q9UJZ1 356 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TNPO3Q9Y5L0 923 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 C1orf232A0A0U1RR37 186 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 E2F8A0AVK6 867 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TBC1D12O60347 775 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PMPCBO75439 489 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CYP1A1P04798 512 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PKN1Q16512 942 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ARHGEF19Q8IW93 802 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 DHRSXQ8N5I4 330 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM121Q9BTD3 319 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 FBXO28Q9NVF7 368 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GPRC5DQ9NZD1 345 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CCDC182A6NF36 153 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 M0QYT0 321 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ASMTLO95671 621 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CAPN1P07384 714 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ATP6V1C1P21283 382 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PPP4CP60510 307 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 MCOLN2Q8IZK6 566 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ATG4AQ8WYN0 398 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 PI4K2AQ9BTU6 479 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SEMA6BQ9H3T3 888 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GPR75-ASB3A0A0A6YYF3 556 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SLC37A4O43826 429 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CAMTA2O94983 1202 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RPN2P04844 631 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CLTBP09497 229 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RPS12P25398 132 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RPL14P50914 215 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 HMGCS2P54868 508 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ATAD3BQ5T9A4 648 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 DHDDSQ86SQ9 333 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ADGRF2Q8IZF7 708 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ZKSCAN4Q969J2 545 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TMEM237Q96Q45 408 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ADAM33Q9BZ11 813 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 REXO4Q9GZR2 422 aaKnown RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CCNB1IP1Q9NPC3 277 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 INTS13Q9NVM9 706 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GUCA1AP43080 201 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ZNF467Q7Z7K2 595 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SLC47A2Q86VL8 602 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 CDK20Q8IZL9 346 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 ANKRD49Q8WVL7 239 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 GMCL1Q96IK5 515 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 LNPEPQ9UIQ6 1025 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 DMTF1Q9Y222 760 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 RWDD3Q9Y3V2 267 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 IPPQ9Y573 584 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 C3P01024 1663 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SLIT3O75094 1523 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 MYH7BA7E2Y1 1941 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 SAGE2PA6NJ88 616 aa7.81□□□□□ -1.16
SF3B3-201ENST00000302516 TPST1O60507 370 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms