RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 NRP1O14786 923 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 BUD23O43709 281 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 TAF11Q15544 211 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 PTPN18Q99952 460 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 DTLQ9NZJ0 730 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 CFAP73A6NFT4 308 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 YJEFN3A6XGL0 299 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 E7ENQ6 273 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 CCL22O00626 93 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 TNPO2O14787 897 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 SNRPAP09012 282 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 UBAP2LQ14157 1087 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 SNX17Q15036 470 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 TFB1MQ8WVM0 346 aaKnown RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 EXT2Q93063 718 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 THTPAQ9BU02 230 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 IPPQ9Y573 584 aa16.07■□□□□ 0.16
CHAF1A-201ENST00000301280 B2RBV5 119 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 MSI1O43347 362 aaKnown RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 PMPCBO75439 489 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 GM2AP17900 193 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CLCNKBP51801 687 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 ANKRD20A2Q5SQ80 823 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 ANKRD20A1Q5TYW2 823 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 NAIF1Q69YI7 327 aaPredicted RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC26A11Q86WA9 606 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 RNF148Q8N7C7 305 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CXorf38Q8TB03 319 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 FNIP1Q8TF40 1166 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 B3GALT6Q96L58 329 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 EBF4Q9BQW3 602 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 FRMD8P1Q9BZ68 369 aaPredicted RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 NMUR2Q9GZQ4 415 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CYP3A43Q9HB55 503 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 USP29Q9HBJ7 922 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 TXLNGQ9NUQ3 528 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 TPI1P60174 286 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 BST2Q10589 180 aaKnown RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 EFHC2Q5JST6 749 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CFAP157Q5JU67 520 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CERCAMQ5T4B2 595 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 CAND1Q86VP6 1230 aaKnown RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 B3GALNT2Q8NCR0 500 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 DENND1AQ8TEH3 1009 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 HTR3CQ8WXA8 447 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 MYADML2A6NDP7 307 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 M0QZ92 97 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 DUSP28Q4G0W2 176 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 TFAP2DQ7Z6R9 452 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 E2F7Q96AV8 911 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 PPCSQ9HAB8 311 aa16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 UBQLN1Q9UMX0 589 aaKnown RBP16.06■□□□□ 0.16
CHAF1A-201ENST00000301280 THPOP40225 353 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 CACNA2D1P54289 1103 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 LILRA4P59901 499 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 LGSNQ5TDP6 509 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 GPRIN1Q7Z2K8 1008 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 IPMKQ8NFU5 416 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 FBXO27Q8NI29 283 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 BHMTQ93088 406 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 PRM3Q9NNZ6 103 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 SFMBT1Q9UHJ3 866 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 NDC80O14777 642 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 CFLARO15519 480 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.161e-8■■■□□ 16.2
CHAF1A-201ENST00000301280 KRT38O76015 456 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 UNC5CO95185 931 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 L1CAMP32004 1257 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 POU6F1Q14863 301 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 RNF139Q8WU17 664 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 MFSD3Q96ES6 412 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 MARK4Q96L34 752 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 SENP8Q96LD8 212 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 PIGVQ9NUD9 493 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 SYBUQ9NX95 663 aa16.05■□□□□ 0.16
CHAF1A-201ENST00000301280 C9IYK1 514 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 PHGDHO43175 533 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 DCTN3O75935 186 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 AMHP03971 560 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 DARSP14868 501 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 VAV1P15498 845 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 ATICP31939 592 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 BCAT1P54687 386 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 GJA9P57773 515 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 ZNF792Q3KQV3 632 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 RYBPQ8N488 228 aaPredicted RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 CCNYL1Q8N7R7 359 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms