RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 EMCNQ9ULC0 261 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 MYO18AQ92614 2054 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 CDK5RAP2Q96SN8 1893 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 PLOD2O00469 737 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 GIPC1O14908 333 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 BIRC5O15392 142 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CAPN15O75808 1086 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ITGBL1O95965 494 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 SERPINE1P05121 402 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 PORP16435 677 aaPredicted RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 SAT1P21673 171 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 TYK2P29597 1187 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CCR10P46092 362 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 OXCT1P55809 520 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CEACAM7Q14002 265 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 PTPN20Q4JDL3 420 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 IL23RQ5VWK5 629 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CYP2R1Q6VVX0 501 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 Q6ZNX1 250 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 ARCQ7LC44 396 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 KYQ8NBH2 561 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 CIB1Q99828 191 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 TDRD3Q9H7E2 651 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
SNX20-201ENST00000300590 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 RIMS3Q9UJD0 308 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 COQ6Q9Y2Z9 468 aa11.29□□□□□ -0.6
SNX20-201ENST00000300590 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 FBP2O00757 339 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PLIN3O60664 434 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 GSRP00390 522 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 C1QAP02745 245 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 HOXD12P35452 270 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 TMED10P49755 219 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 GTF2A2P52657 109 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 CD300CQ08708 224 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 APOFQ13790 326 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PCLAFQ15004 111 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 ZBTB33Q86T24 672 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 GCOM2Q9BZD3 368 aaPredicted RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 PCDHAC1Q9H158 963 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 TBC1D23Q9NUY8 699 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PIK3R1P27986 724 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 L1CAMP32004 1257 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 GABRB2P47870 512 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 MYL6P60660 151 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 ELMSAN1Q6PJG2 1045 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 ZNF786Q8N393 782 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PCDH20Q8N6Y1 951 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 UBR7Q8N806 425 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PDCD6IPQ8WUM4 868 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 LRTOMTQ8WZ04 291 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 SLC35B4Q969S0 331 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 GFM2Q969S9 779 aaKnown RBP11.28□□□□□ -0.6
SNX20-201ENST00000300590 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 KLC2Q9H0B6 622 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 GABBR1Q9UBS5 961 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 FIS1Q9Y3D6 152 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 PSAT1Q9Y617 370 aa11.28□□□□□ -0.6
SNX20-201ENST00000300590 WDR27A2RRH5 827 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 EXTL3O43909 919 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 ZBTB11O95625 1053 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 ALDOAP04075 364 aaKnown RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 CKMT2P17540 419 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 TCF7P36402 384 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 PGGT1BP53609 377 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 BTG3Q14201 252 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 C15orf59Q2T9L4 293 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 WDR78Q5VTH9 848 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 ADCY4Q8NFM4 1077 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 KBTBD7Q8WVZ9 684 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 NLRP4Q96MN2 994 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 NPAS2Q99743 824 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 TCF7L2Q9NQB0 619 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 TXNDC16Q9P2K2 825 aa11.27□□□□□ -0.6
SNX20-201ENST00000300590 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 CCNL1Q9UK58 526 aaPredicted RBP11.27□□□□□ -0.6
SNX20-201ENST00000300590 TMEM247A6NEH6 219 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 PSMD12O00232 456 aaPredicted RBP11.27□□□□□ -0.61
SNX20-201ENST00000300590 CCNE2O96020 404 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 RAP1GAPP47736 663 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 TGFBIQ15582 683 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 MTERF2Q49AM1 385 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 TMEM53Q6P2H8 277 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 THNSL1Q8IYQ7 743 aa11.27□□□□□ -0.61
SNX20-201ENST00000300590 TMEM130Q8N3G9 435 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms