RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DTNBP1Q96EV8 351 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SHOC2Q9UQ13 582 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PXDNLA1KZ92 1463 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CPS1P31327 1500 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCDC154A6NI56 674 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BUD23O43709 281 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BANF1O75531 89 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RAG1P15918 1043 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TBL1YQ9BQ87 522 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 EMILIN2Q9BXX0 1053 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ARHGEF3Q9NR81 526 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF112Q9UJU3 913 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 UNC13BO14795 1591 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C1orf167Q5SNV9 1468 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KLRC2P26717 231 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GUCA1AP43080 201 aaPredicted RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF470Q6ECI4 717 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 XRRA1Q6P2D8 792 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PARVBQ9HBI1 364 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCDC167Q9P0B6 97 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PDHXO00330 501 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 VAPBO95292 243 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ALDH2P05091 517 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 EPHX2P34913 555 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KPNA1P52294 538 aaPredicted RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RSBN1Q5VWQ0 802 aaPredicted RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCDC149Q6ZUS6 474 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 AGBL3Q8NEM8 1001 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MIEF2Q96C03 454 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SH3GL1Q99961 368 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 COMMD8Q9NX08 183 aa13.88□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF862O60290 1169 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ATG7O95352 703 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 OVOS1Q6IE37 1185 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MRPL39Q9NYK5 338 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DNPEPQ9ULA0 475 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DRG1Q9Y295 367 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ADGRB3O60242 1522 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KLHL18O94889 574 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C19orf18Q8NEA5 215 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC2A14Q8TDB8 520 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MPP4Q96JB8 637 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TBC1D13Q9NVG8 400 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IFRD1O00458 451 aaPredicted RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BEX3Q00994 111 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF280DQ6N043 979 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C11orf88Q6PI97 169 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ABRAQ8N0Z2 381 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 UCMAQ8WVF2 138 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NCKIPSDQ9NZQ3 722 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PTGES3LE9PB15 166 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BTN3A1O00481 513 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HMGCRP04035 888 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MPOP05164 745 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TPBGLP0DKB5 382 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BDNFP23560 247 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RPS12P25398 132 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PKNOX1P55347 436 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DPP10Q8N608 796 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NETO2Q8NC67 525 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MYLK2Q9H1R3 596 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FBXO10Q9UK96 956 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 JCADQ9P266 1359 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A0A0U1RQJ8 604 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CBX6O95503 412 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RBP1P09455 135 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RAB14P61106 215 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAAP100Q0VG06 881 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TOMM20Q15388 145 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 WDR36Q8NI36 951 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FRMD8P1Q9BZ68 369 aaPredicted RBP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZDHHC6Q9H6R6 413 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TCF7L2Q9NQB0 619 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KBTBD4Q9NVX7 518 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PDP2Q9P2J9 529 aa13.87□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ADM5C9JUS6 153 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CLPTM1O96005 669 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CD151P48509 253 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms