RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 BROXQ5VW32 411 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 EZH1Q92800 747 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 SLC5A5Q92911 643 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 HPDLQ96IR7 371 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 FICDQ9BVA6 458 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 DDIT4Q9NX09 232 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 CRNNQ9UBG3 495 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ING4Q9UNL4 249 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 A0A0G2JPF8 293 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 HNRNPCL3B7ZW38 293 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 HNRNPCL4P0DMR1 293 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 MCL1Q07820 350 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 TIMM50Q3ZCQ8 353 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 NET1Q7Z628 596 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 CAMK1DQ8IU85 385 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 APBB2Q92870 758 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 NDNQ99608 321 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 PLA2R1Q13018 1463 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 MAP3K4Q9Y6R4 1608 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 RRM1P23921 792 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 LTKP29376 864 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 GRK3P35626 688 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 HALP42357 657 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ANTXR2P58335 489 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 PDK2Q15119 407 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 AKAP14Q86UN6 197 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 HIPK1Q86Z02 1210 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 FAM126BQ8IXS8 530 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 RNASE11Q8TAA1 199 aaKnown RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 CMTM6Q9NX76 183 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SLAIN2Q9P270 581 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 MLXQ9UH92 298 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 H7C0S8 307 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 EPS8Q12929 822 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SNX17Q15036 470 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SLC5A9Q2M3M2 681 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 YTHDF3Q7Z739 585 aaKnown RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 PROSER1Q86XN7 944 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 PARP8Q8N3A8 854 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 AMER2Q8N7J2 671 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 LRMDAQ9H2I8 198 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SLC26A4O43511 780 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 UNC5CO95185 931 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 TFRCP02786 760 aaKnown RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 STARP49675 285 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ADAM17P78536 824 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 PTAR1Q7Z6K3 402 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 EXD1Q8NHP7 514 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 DLG3Q92796 817 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 GDF3Q9NR23 364 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 MRPS7Q9Y2R9 242 aaKnown RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SF3B1O75533 1304 aaKnown RBP eCLIP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 A0A0A6YYK5 440 aaPredicted RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ITGB3P05106 788 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ANPEPP15144 967 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF543Q08ER8 600 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 DENND5AQ6IQ26 1287 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 LRRC17Q8N6Y2 441 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 SLC20A1Q8WUM9 679 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 WDR41Q9HAD4 459 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 UBP1Q9NZI7 540 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 HBS1LQ9Y450 684 aaKnown RBP15.18■□□□□ 0.02
SCN3B-201ENST00000299333 AK5Q9Y6K8 562 aa15.18■□□□□ 0.02
SCN3B-201ENST00000299333 BCLAF3A2AJT9 711 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CCNA2P20248 432 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ATP6V1C1P21283 382 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 STAT5AP42229 794 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 GUCA1AP43080 201 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 GALK1P51570 392 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TMEM62Q0P6H9 643 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ARHGEF6Q15052 776 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PIGBQ92521 554 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TBCDQ9BTW9 1192 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TBC1D10AQ9BXI6 508 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TEX13BQ9BXU2 312 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 OSBPL6Q9BZF3 934 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 MID1IP1Q9NPA3 183 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 SH3BP4Q9P0V3 963 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 RPH3AQ9Y2J0 694 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CD4P01730 458 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 RPA3P35244 121 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 SPIDRQ14159 915 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 MZT2AQ6P582 158 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 EMC1Q8N766 993 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 FAM172AQ8WUF8 416 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CELF1Q92879 486 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 DCLK3Q9C098 648 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ACTR8Q9H981 624 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PACSIN3Q9UKS6 424 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PEX14O75381 377 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TADA2AO75478 443 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TXNP10599 105 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 YWHAQP27348 245 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 RPA1P27694 616 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms