RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 EBNA1BP2Q99848 306 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TJP2Q9UDY2 1190 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 BCAP29Q9UHQ4 241 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 PCDHA11Q9Y5I1 949 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 NRXN2Q9P2S2 1712 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 H0YJX3 145 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 H7C0C1 242 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 WDR46O15213 610 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 H6PDO95479 791 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 APRTP07741 180 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF26P17031 533 aaPredicted RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 SFNP31947 248 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 PHKA2P46019 1235 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 ATP5OP48047 213 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 NUP107P57740 925 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 MMRN1Q13201 1228 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 SPIDRQ14159 915 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 VPS72Q15906 364 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 METTL21CQ5VZV1 264 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TMEM53Q6P2H8 277 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 BNC2Q6ZN30 1099 aaPredicted RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 SP8Q8IXZ3 490 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 VPS50Q96JG6 964 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF512Q96ME7 567 aaPredicted RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 ZC3H12CQ9C0D7 883 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 COG4Q9H9E3 785 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 MOCS1Q9NZB8 636 aa13.88□□□□□ -0.19
RPUSD4-201ENST00000298317 TPP1O14773 563 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 KCNN4O15554 427 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 KLHL41O60662 606 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ZBED1O96006 694 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ASS1P00966 412 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 GLDCP23378 1020 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ACAP1Q15027 740 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CYTH1Q15438 398 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 TRAPPC3LQ5T215 181 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CARM1Q86X55 608 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 DSELQ8IZU8 1212 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 MPP5Q8N3R9 675 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 SDR16C5Q8N3Y7 309 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 EMC1Q8N766 993 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 KYQ8NBH2 561 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 BHLHE22Q8NFJ8 381 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CEP170P1Q96L14 293 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PDLIM7Q9NR12 457 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 COPG2Q9UBF2 871 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 DCDC2Q9UHG0 476 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CCNL1Q9UK58 526 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 USP18Q9UMW8 372 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 HTR3EA5X5Y0 456 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 AIM2O14862 343 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 TBC1D12O60347 775 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PLA2G6O60733 806 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ATG7O95352 703 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PDGFRBP09619 1106 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CD1EP15812 388 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 RAB15P59190 212 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 TUBA4AP68366 448 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 MS4A2Q01362 244 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PDCD4Q53EL6 469 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF394Q53GI3 561 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CYS1Q717R9 158 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CNDP1Q96KN2 507 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 ZNF597Q96LX8 424 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 MRIQ9BWK5 157 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CDH19Q9H159 772 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PFDN4Q9NQP4 134 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 IGSF9Q9P2J2 1179 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 PCDHB12Q9Y5F1 795 aa13.87□□□□□ -0.19
RPUSD4-201ENST00000298317 H0YCG3 227 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 H3BNH8 94 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 PPEF1O14829 653 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 BCAS2O75934 225 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 RALBP11234 206 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 PIK3R1P27986 724 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 EPHA3P29320 983 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 HSPA2P54652 639 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 NAA20P61599 178 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 KRT76Q01546 638 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 SLC10A2Q12908 348 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 TFDP2Q14188 446 aa13.86□□□□□ -0.19
RPUSD4-201ENST00000298317 MEX3CQ5U5Q3 659 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms