RNA–Protein interactions for RNA: ENST00000295874.14

PTPRG-201, Transcript of protein tyrosine phosphatase, receptor type G, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRG, Length 4,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Dendrite, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRG-201ENST00000295874 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 CCNYL1Q8N7R7 359 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SH3GL1Q99961 368 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 MAF1Q9H063 256 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SPATC1LQ9H0A9 340 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 HMX1Q9NP08 348 aaPredicted RBP12.64□□□□□ -0.39
PTPRG-201ENST00000295874 XPNPEP1Q9NQW7 623 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 ARHGEF3Q9NR81 526 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 MGRN1O60291 552 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SYNCRIPO60506 623 aaKnown RBP12.64□□□□□ -0.39
PTPRG-201ENST00000295874 EDF1O60869 148 aaKnown RBP12.64□□□□□ -0.39
PTPRG-201ENST00000295874 CKMP06732 381 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 ZNF555Q8NEP9 628 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SPATA16Q9BXB7 569 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 LRRC4CQ9HCJ2 640 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SEPT3Q9UH03 358 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 SLC30A1Q9Y6M5 507 aa12.64□□□□□ -0.39
PTPRG-201ENST00000295874 hCG_2014768A0A024R1R8 64 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 CARNS1A5YM72 827 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 MICAL2O94851 1124 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 KRT16P08779 473 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 THPOP40225 353 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 SULT1E1P49888 294 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ELAVL2Q12926 359 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 PRPF39Q86UA1 669 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 TDRPQ86YL5 185 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 TMEM237Q96Q45 408 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.63□□□□□ -0.393e-7■■■□□ 14.8
PTPRG-201ENST00000295874 C6orf203Q9P0P8 240 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 H7C4K7 107 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 KPNA6O60684 536 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 POLBP06746 335 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ACADSP16219 412 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 RCN1Q15293 331 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 RFX8Q6ZV50 586 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 NDEL1Q9GZM8 345 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 GPR182O15218 404 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 CDH8P55286 799 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 RASA2Q15283 850 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 STK32AQ8WU08 396 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 PRCCQ92733 491 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 LRRC39Q96DD0 335 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 RNPEPL1Q9HAU8 725 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
PTPRG-201ENST00000295874 SLC25A13Q9UJS0 675 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
PTPRG-201ENST00000295874 AP3B1O00203 1094 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 GLRA3O75311 464 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 ARIH2O95376 493 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CBX6O95503 412 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 ACADMP11310 421 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 NME3Q13232 169 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 DGKZQ13574 1117 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 MDH1BQ5I0G3 518 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 AARS2Q5JTZ9 985 aaKnown RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CCDC149Q6ZUS6 474 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 BTBD10Q9BSF8 475 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 DHX33Q9H6R0 707 aaKnown RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 GPATCH2LQ9NWQ4 482 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 UBA6A0AVT1 1052 aaPredicted RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 SERPIND1P05546 499 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 EPHB2P29323 1055 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 AVPR1AP37288 418 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 TNFSF9P41273 254 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 LY6KQ17RY6 165 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 DEFB115Q30KQ5 88 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 ADNPQ9H2P0 1102 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 SLCO1B3Q9NPD5 702 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 C5orf58C9J3I9 102 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CHADO15335 359 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CPA2P48052 419 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 INHBEP58166 350 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CUL3Q13618 768 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CMTM5Q96DZ9 223 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
PTPRG-201ENST00000295874 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
PTPRG-201ENST00000295874 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms