RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ARID5AQ03989 594 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PTK2Q05397 1052 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 KRT31Q15323 416 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ELF2Q15723 593 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PLK5Q496M5 336 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 AASDHQ4L235 1098 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 MSS51Q4VC12 460 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 USP39Q53GS9 565 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CCDC183Q5T5S1 534 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 SYPL2Q5VXT5 272 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 SDE2Q6IQ49 451 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 MSANTD2Q6P1R3 559 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PRR23CQ6ZRP0 262 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 TRMT11Q7Z4G4 463 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ANKS1BQ7Z6G8 1248 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ZNF276Q8N554 614 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 AOPEPQ8N6M6 819 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 C12orf50Q8NA57 414 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 WFDC5Q8TCV5 224 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 IPO4Q8TEX9 1081 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CYB5D2Q8WUJ1 264 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 IRGQQ8WZA9 623 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 SPACA7Q96KW9 195 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PRICKLE1Q96MT3 831 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CPXM1Q96SM3 734 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 USB1Q9BQ65 265 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CD93Q9NPY3 652 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 FAM207AQ9NSI2 230 aaPredicted RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 FANCLQ9NW38 375 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CALCOCO1Q9P1Z2 691 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 XPO7Q9UIA9 1087 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CDV3Q9UKY7 258 aaKnown RBP10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CYP8B1Q9UNU6 501 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 CNTN6Q9UQ52 1028 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 PLXND1Q9Y4D7 1925 aa10.17□□□□□ -0.78
CCDC58-201ENST00000291458 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 GOLGA8SH3BPF8 625 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 SART1O43290 800 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 GDF9O60383 454 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 GFPT2O94808 682 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 EPN2O95208 641 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 MBD3O95983 291 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 APOEP02649 317 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 FYNP06241 537 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 TPM2P07951 284 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CISD3P0C7P0 127 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 HLA-EP13747 358 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 GABRG2P18507 467 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 EEF1GP26641 437 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 KRT9P35527 623 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 MPLP40238 635 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 IL12RB1P42701 662 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 SLC11A2P49281 568 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 LMNB2Q03252 620 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 KCNMA1Q12791 1236 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 PTPN20Q4JDL3 420 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 FNDC3BQ53EP0 1204 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 MPPE1Q53F39 396 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 C2CD6Q53TS8 623 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 DCAF6Q58WW2 860 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 ZC3H12AQ5D1E8 599 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 KLHDC7AQ5VTJ3 777 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 RAP1GAP2Q684P5 730 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 NUGGCQ68CJ6 796 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 NADSYN1Q6IA69 706 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CHST9Q7L1S5 443 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CYP2U1Q7Z449 544 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 RETREG3Q86VR2 466 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 RASSF3Q86WH2 238 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CHSY1Q86X52 802 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CIR1Q86X95 450 aaPredicted RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 TMEFF1Q8IYR6 380 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CFAP52Q8N1V2 620 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 SCML4Q8N228 414 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CPXM2Q8N436 756 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CARNMT1Q8N4J0 409 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 SLC20A1Q8WUM9 679 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 RNF34Q969K3 372 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 TMA16Q96EY4 203 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 MYEOVQ96EZ4 313 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 PPP1R13BQ96KQ4 1090 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 FCRL2Q96LA5 508 aaPredicted RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 FAM81BQ96LP2 452 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 SERPINB11Q96P15 392 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 DUSP15Q9H1R2 295 aaPredicted RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 NLRC4Q9NPP4 1024 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 ABCB8Q9NUT2 735 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 ANO10Q9NW15 660 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 TMEM63CQ9P1W3 806 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CEP83Q9Y592 693 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 VPS13AQ96RL7 3174 aa10.16□□□□□ -0.78
CCDC58-201ENST00000291458 NYNRINQ9P2P1 1898 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 TNRC6BQ9UPQ9 1833 aaKnown RBP10.16□□□□□ -0.78
CCDC58-201ENST00000291458 CCDC163A0A0D9SF12 145 aa10.15□□□□□ -0.78
CCDC58-201ENST00000291458 A0A1W2PQF6 199 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms