RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 VEGFAP15692 232 aaPredicted RBP17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 IL12AP29459 219 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 TRAF2Q12933 501 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 IL17AQ16552 155 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 ACCSLQ4AC99 568 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 PLEKHM3Q6ZWE6 761 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 SLC47A2Q86VL8 602 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 SLC25A41Q8N5S1 370 aa17.94■□□□□ 0.46
PCDHA13-201ENST00000289272 C17orf102A2RUQ5 167 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TMEM191CA6NGB0 347 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HACD1B0YJ81 288 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 CXCL11O14625 94 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HOXA10P31260 410 aaPredicted RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 ELK3P41970 407 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 FOLH1Q04609 750 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TCHHL1Q5QJ38 904 aaPredicted RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 ATAD3BQ5T9A4 648 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 C15orf52Q6ZUT6 534 aaKnown RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 ULK2Q8IYT8 1036 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 SFRP1Q8N474 314 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 CYP2W1Q8TAV3 490 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 NAT14Q8WUY8 206 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 CGRRF1Q99675 332 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 GALNT8Q9NY28 637 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 SLC12A4Q9UP95 1085 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 FRMPD4Q14CM0 1322 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TRIM38O00635 465 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 PROCP04070 461 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TCF7P36402 384 aaPredicted RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 SLC5A5Q92911 643 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 MTERF3Q96E29 417 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 GLT1D1Q96MS3 346 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 DFFAO00273 331 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 PLSCR1O15162 318 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HIST1H2AGP0C0S8 130 aaPredicted RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HIST1H2ADP20671 130 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 BNIP2Q12982 314 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 C1DQ13901 141 aaKnown RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 LPIN1Q14693 890 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HIST1H2AHQ96KK5 128 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 CDRT15Q96T59 188 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 HIST1H2AJQ99878 128 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 TMEM121Q9BTD3 319 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 H2AFJQ9BTM1 129 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 ITGA11Q9UKX5 1188 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 WDR37Q9Y2I8 494 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 BNIP3LO60238 219 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 IFNA14P01570 189 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 SUPT20HL2P0C7V6 817 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 ADSSP30520 456 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 MARSP56192 900 aaKnown RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 MAD2L1Q13257 205 aaPredicted RBP17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 QPCTQ16769 361 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 SPDYAQ5MJ70 313 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 PIGWQ7Z7B1 504 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 COX4I2Q96KJ9 171 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 PRRG3Q9BZD7 231 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 POLG2Q9UHN1 485 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 GAKO14976 1311 aa17.93■□□□□ 0.46
PCDHA13-201ENST00000289272 GRAP2O75791 330 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 BLVRAP53004 296 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 MPP3Q13368 585 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 NCF4Q15080 339 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 DNAAF5Q86Y56 855 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 CLEC4MQ9H2X3 399 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 DHX33Q9H6R0 707 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 CRNNQ9UBG3 495 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 UBA2Q9UBT2 640 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 SCAF8Q9UPN6 1271 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 REXO2Q9Y3B8 237 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 MRASO14807 208 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 ZSCAN9O15535 394 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 STAG3L1P0CL83 205 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 CCNA2P20248 432 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 SMAD1Q15797 465 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 SV2AQ7L0J3 742 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 MINDY2Q8NBR6 621 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 SYTL5Q8TDW5 730 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 ASIC4Q96FT7 647 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 IDI2Q9BXS1 227 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 SIK2Q9H0K1 926 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 EBF2Q9HAK2 575 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 CLIC5Q9NZA1 410 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 PSMD13Q9UNM6 376 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 HOXA2O43364 376 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 GJB6O95452 261 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 FGRP09769 529 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 EPHX2P34913 555 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 AGKQ53H12 422 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 MRNIPQ6NTE8 343 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 C8orf59Q8N0T1 100 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 ST13P5Q8NFI4 369 aaPredicted RBP17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 RDH11Q8TC12 318 aa17.92■□□□□ 0.46
PCDHA13-201ENST00000289272 ACTL9Q8TC94 416 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms