RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 GEN1Q17RS7 908 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SCARA3Q6AZY7 606 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 LRRC8BQ6P9F7 803 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 POTEAQ6S8J7 498 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.33□□□□□ -0.765e-12■■□□□ 12.2
HMGCR-201ENST00000287936 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGCR-201ENST00000287936 VPS39Q96JC1 886 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 POPDC2Q9HBU9 364 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 ARMCX1Q9P291 453 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 ZNF212Q9UDV6 495 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 VANGL2Q9ULK5 521 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SOX13Q9UN79 622 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 MYL4P12829 197 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 NEK3P51956 506 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 GBE1Q04446 702 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SNX30Q5VWJ9 437 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 MAP1SQ66K74 1059 aaPredicted RBP10.33□□□□□ -0.76
HMGCR-201ENST00000287936 STRA8Q7Z7C7 330 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 PIGZQ86VD9 579 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 ST13P4Q8IZP2 240 aaPredicted RBP10.33□□□□□ -0.76
HMGCR-201ENST00000287936 PIWIL2Q8TC59 973 aaKnown RBP10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SLC26A7Q8TE54 656 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
HMGCR-201ENST00000287936 PEBP4Q96S96 227 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 VAT1Q99536 393 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 CYP4F11Q9HBI6 524 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 BRWD3Q6RI45 1802 aa10.33□□□□□ -0.76
HMGCR-201ENST00000287936 GOT1P17174 413 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 NPY2RP49146 381 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 AIF1P55008 147 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 USP10Q14694 798 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 PRKD1Q15139 912 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 DUSP28Q4G0W2 176 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 ATPAF2Q8N5M1 289 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TSC22D3Q99576 134 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 B3GNT5Q9BYG0 378 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 KCNH4Q9UQ05 1017 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 LRCH1Q9Y2L9 728 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TPP1O14773 563 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 LIN7AO14910 233 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 GSC2O15499 205 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 NPR3P17342 541 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 KPNB1Q14974 876 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MMEL1Q495T6 779 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 OLFML1Q6UWY5 402 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TOP6BLQ8N6T0 577 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 C12orf65Q9H3J6 166 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TASP1Q9H6P5 420 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 WDCPQ9H6R7 721 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MRPL40Q9NQ50 206 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 FBXO6Q9NRD1 293 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MRGBPQ9NV56 204 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 DNAJC6O75061 913 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 ENTPD5O75356 428 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 SERPINA6P08185 405 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 PSMB4P28070 264 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 PRKAA2P54646 552 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MAP3K7CLP57077 242 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MPP3Q13368 585 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 SEMA5AQ13591 1074 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 MFSD10Q14728 455 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 BTBD8Q5XKL5 378 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 TMEM154Q6P9G4 183 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 PACS1Q6VY07 963 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 C4orf50Q6ZRC1 276 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 ASRGL1Q7L266 308 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 NET1Q7Z628 596 aaPredicted RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 B3GALNT2Q8NCR0 500 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 DNAJB3Q8WWF6 145 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 SYT15Q9BQS2 421 aa10.32□□□□□ -0.76
HMGCR-201ENST00000287936 EIF2B3Q9NR50 452 aaKnown RBP10.32□□□□□ -0.76
HMGCR-201ENST00000287936 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 DFFAO00273 331 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 CRCPO75575 148 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 FAM155BO75949 473 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 ANXA9O76027 345 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 MMP3P08254 477 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 PTDSS1P48651 473 aaKnown RBP10.31□□□□□ -0.76
HMGCR-201ENST00000287936 TAZQ16635 292 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 CA9Q16790 459 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 C16orf89Q6UX73 402 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 LRRC74BQ6ZQY2 392 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 TTC30AQ86WT1 665 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 KIRREL3Q8IZU9 778 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 JADE3Q92613 823 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 TINF2Q9BSI4 451 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 ILKAPQ9H0C8 392 aaPredicted RBP10.31□□□□□ -0.76
HMGCR-201ENST00000287936 CATSPERBQ9H7T0 1116 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 G3BP2Q9UN86 482 aaKnown RBP10.31□□□□□ -0.76
HMGCR-201ENST00000287936 ARHGAP26Q9UNA1 814 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 AAR2Q9Y312 384 aaKnown RBP10.31□□□□□ -0.76
HMGCR-201ENST00000287936 COMMD10Q9Y6G5 202 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 SLC15A5A6NIM6 579 aa10.31□□□□□ -0.76
HMGCR-201ENST00000287936 SMIM10L2AP0DMW4 78 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms