RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PCSK1NQ9UHG2 260 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 BLOC1S6Q9UL45 172 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 HMX2A2RU54 273 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 CXorf49A8MYA2 514 aaPredicted RBP10.69□□□□□ -0.7
SKA1-201ENST00000285116 VILLO15195 856 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 PRPSAP2O60256 369 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 CCNT2O60583 730 aaKnown RBP10.69□□□□□ -0.7
SKA1-201ENST00000285116 PIAS1O75925 651 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 MCF2P10911 925 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 ZFXP17010 805 aaPredicted RBP10.69□□□□□ -0.7
SKA1-201ENST00000285116 CPOXP36551 454 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 CLCN2P51788 898 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 TNFAIP2Q03169 654 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 TUBB3Q13509 450 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 SEMA5AQ13591 1074 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 LPCAT4Q643R3 524 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 NPNTQ6UXI9 565 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 UNC5AQ6ZN44 842 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 NT5DC4Q86YG4 428 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 ZDHHC17Q8IUH5 632 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 PYDC1Q8WXC3 89 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 STON2Q8WXE9 905 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 RPF1Q9H9Y2 349 aaKnown RBP10.69□□□□□ -0.7
SKA1-201ENST00000285116 PCDH18Q9HCL0 1135 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 SMYD2Q9NRG4 433 aa10.69□□□□□ -0.7
SKA1-201ENST00000285116 POLR2AP24928 1970 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 A0A0J9YVX5 310 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ARHGAP42A6NI28 874 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 H7C0C1 242 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ZNF189O75820 626 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ATP5OP48047 213 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 HMGCS2P54868 508 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 TMPRSS15P98073 1019 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PDE1BQ01064 536 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 MBTD1Q05BQ5 628 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 MMRN1Q13201 1228 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CYLC2Q14093 348 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 RABGAP1LQ5R372 815 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 FAM102AQ5T9C2 384 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 OLFML2BQ68BL8 750 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 C1orf228Q6PIY5 440 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 RBM44Q6ZP01 1051 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 RIOX2Q8IUF8 465 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 NUDCD3Q8IVD9 361 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PPM1NQ8N819 430 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 SLC26A7Q8TE54 656 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PPP1R13LQ8WUF5 828 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 RXFP2Q8WXD0 754 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CFAP36Q96G28 342 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ACAP3Q96P50 834 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 TWNKQ96RR1 684 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CDT1Q9H211 546 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 EIF2B3Q9NR50 452 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 ADAMTS6Q9UKP5 1117 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 BARX2Q9UMQ3 279 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 C15orf38-AP3S2A0A0A6YYH1 394 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PRR5-ARHGAP8B1AHC4 643 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 M0QYV0 167 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CASQ2O14958 399 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 KCNN4O15554 427 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 GSRP00390 522 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 TCF7P36402 384 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 ALDH18A1P54886 795 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 AQP5P55064 265 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ARHGAP8P85298 464 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CHI3L2Q15782 390 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 INSCQ1MX18 579 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 RNF111Q6ZNA4 994 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ARPINQ7Z6K5 226 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ICA1LQ8NDH6 482 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 SMYD3Q9H7B4 428 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 DNAJC28Q9NX36 388 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PLK2Q9NYY3 685 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ITGA11Q9UKX5 1188 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 TXNDC9O14530 226 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ATP6V1G1O75348 118 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 KLHL2O95198 593 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PGM3O95394 542 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CLPTM1O96005 669 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 ZBED1O96006 694 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 FAM163BP0C2L3 166 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CSH1P0DML2 217 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 CSH2P0DML3 217 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PEX2P28328 305 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 PRDX6P30041 224 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 RAP1GAPP47736 663 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 NIPAL4Q0D2K0 466 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 FRG1Q14331 258 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 CCDC14Q49A88 953 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 MBLAC2Q68D91 279 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 ZC3H15Q8WU90 426 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 ZFRQ96KR1 1074 aaKnown RBP10.68□□□□□ -0.7
SKA1-201ENST00000285116 RILPQ96NA2 401 aa10.68□□□□□ -0.7
SKA1-201ENST00000285116 QKIQ96PU8 341 aaKnown RBP eCLIP10.68□□□□□ -0.72e-9■■■■■ 48.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms