RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TASP1Q9H6P5 420 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 GKN1Q9NS71 199 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 CWC15Q9P013 229 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 XPO7Q9UIA9 1087 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 CLUHO75153 1309 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 FAM72CH0Y354 149 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 KRIT1O00522 736 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 TJP3O95049 919 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 CKMP06732 381 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 ARL4AP40617 200 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 HARS2P49590 506 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 ZNF135P52742 658 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 KLF1Q13351 362 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 GPR158Q5T848 1215 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 FAM72AQ5TYM5 149 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 KAZNQ674X7 775 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 FAM72DQ6L9T8 149 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 SYCE2Q6PIF2 218 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 GPR149Q86SP6 731 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 FAM72BQ86X60 149 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 GPR161Q8N6U8 529 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 MAIP1Q8WWC4 291 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 LRCH3Q96II8 777 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 RNF157Q96PX1 679 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 MAK16Q9BXY0 300 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 SIK2Q9H0K1 926 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 ANKZF1Q9H8Y5 726 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 SMPD4Q9NXE4 827 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 ZMYM5Q9UJ78 669 aa19.57■□□□□ 0.72
PDLIM3-202ENST00000284770 TCRBV7S2A1N4TA0A589 114 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 CCDC188H7C350 402 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 CREB3O43889 395 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 STC2O76061 302 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 GOT1P17174 413 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 HCAR3P49019 387 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 MLLT6P55198 1093 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 ADCY2Q08462 1091 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 CTC1Q2NKJ3 1217 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 ACBD5Q5T8D3 534 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 ADAT2Q7Z6V5 191 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 CSPG4P5Q96PW8 444 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 EPAS1Q99814 870 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 MRPS23Q9Y3D9 190 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 CPQQ9Y646 472 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 HS3ST4Q9Y661 456 aa19.56■□□□□ 0.72
PDLIM3-202ENST00000284770 DENND4CQ5VZ89 1909 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 H3BRJ5 948 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 IGFBP4P22692 258 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 ZXDBP98169 803 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 NRG1Q02297 640 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 SIX1Q15475 284 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 CMTM8Q8IZV2 173 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 PCDH19Q8TAB3 1148 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 AZIN2Q96A70 460 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 CLEC1BQ9P126 229 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 SNX10Q9Y5X0 201 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 NOTCH4Q99466 2003 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 EEF2KO00418 725 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 CST8O60676 142 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 LRIG2O94898 1065 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 RHOXF2BP0C7M4 288 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 TFDP2Q14188 446 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 MS4A13Q5J8X5 152 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 PIK3R6Q5UE93 754 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 RFX8Q6ZV50 586 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 BBS12Q6ZW61 710 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 RFX6Q8HWS3 928 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 FAM161BQ96MY7 647 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 RHOXF2Q9BQY4 288 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 APOL5Q9BWW9 433 aa19.55■□□□□ 0.72
PDLIM3-202ENST00000284770 DOCK6Q96HP0 2047 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 PRRC2BQ5JSZ5 2229 aaKnown RBP19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 KLKB1P03952 638 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 CEBPBP17676 345 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 AVPR1AP37288 418 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 GGCXP38435 758 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 SLC11A2P49281 568 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 TPI1P60174 286 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 DENND1CQ8IV53 801 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 PQLC3Q8N755 202 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 PRELID2Q8N945 189 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 ITFG1Q8TB96 612 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 ADAMTS19Q8TE59 1207 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 KRT12Q99456 494 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 GAS2L1Q99501 681 aaPredicted RBP19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 LRRC1Q9BTT6 524 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 ADAM7Q9H2U9 754 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 SLITRK6Q9H5Y7 841 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 PRDM16Q9HAZ2 1276 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 ARHGAP26Q9UNA1 814 aa19.54■□□□□ 0.72
PDLIM3-202ENST00000284770 GOLGA6L10A0A0M3HER8 536 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 ACSL4O60488 711 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 IRF1P10914 325 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 HTR7P34969 479 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 DPYSQ14117 519 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 COL19A1Q14993 1142 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 MANEALQ5VSG8 457 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 SLC9A4Q6AI14 798 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms