RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RTL3Q8N8U3 475 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 LPCAT1Q8NF37 534 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FAM172AQ8WUF8 416 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HIST1H2ACQ93077 130 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 LRRC39Q96DD0 335 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 LMAN2LQ9H0V9 348 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 AGPAT3Q9NRZ7 376 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 COMMD8Q9NX08 183 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 IL1RAPL1Q9NZN1 696 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZMYM5Q9UJ78 669 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 VANGL2Q9ULK5 521 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 BARX2Q9UMQ3 279 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SCAF8Q9UPN6 1271 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SLC9A8Q9Y2E8 581 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TMEM191CA6NGB0 347 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PP2D1A8MPX8 630 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NCK2O43639 380 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CRABP2P29373 138 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RCVRNP35243 200 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SREBF1P36956 1147 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 DMTNQ08495 405 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZDHHC20Q5W0Z9 365 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KIAA0408Q6ZU52 694 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 GPR141Q7Z602 305 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PRPF39Q86UA1 669 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FBXO39Q8N4B4 442 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 AVL9Q8NBF6 648 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 USP7Q93009 1102 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MTERF3Q96E29 417 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PRMT6Q96LA8 375 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PPP1R10Q96QC0 940 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ABCG4Q9H172 646 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KCTD10Q9H3F6 313 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ATXN3LQ9H3M9 355 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SPG21Q9NZD8 308 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MAP10Q9P2G4 905 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZNF510Q9Y2H8 683 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PRRC2BQ5JSZ5 2229 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 IQSEC2Q5JU85 1478 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HACD1B0YJ81 288 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KPNA3O00505 521 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SGTAO43765 313 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CYP7B1O75881 506 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CCNDBP1O95273 360 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PGAM1P18669 254 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 DGKAP23743 735 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FEN1P39748 380 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MDH1P40925 334 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CTCFP49711 727 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NUDT2P50583 147 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RHAGQ02094 409 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PLOD1Q02809 727 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 VAC14Q08AM6 782 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MAPK7Q13164 816 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 BOP1Q14137 746 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ACOX1Q15067 660 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SPANXN2Q5MJ10 180 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RSBN1Q5VWQ0 802 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PCNX4Q63HM2 1172 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 LIN54Q6MZP7 749 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CCDC103Q8IW40 242 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 AHI1Q8N157 1196 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CXorf40BQ96DE9 158 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 THOC1Q96FV9 657 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KIFC1Q9BW19 673 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 NT5MQ9NPB1 228 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 METTL5Q9NRN9 209 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 LRRC4BQ9NT99 713 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TRAV19A0A0A6YYK7 116 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 PCNAP12004 261 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 AKAP5P24588 427 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CDK7P50613 346 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SNRPD1P62314 119 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SULT2A1Q06520 285 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MPP3Q13368 585 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ATP13A5Q4VNC0 1218 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ARMC12Q5T9G4 340 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 SERPINA13PQ6UXR4 307 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 DENND5BQ6ZUT9 1274 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CYB5R4Q7L1T6 521 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FAM126BQ8IXS8 530 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 GPR135Q8IZ08 494 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TMEM132CQ8N3T6 1108 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 AADATQ8N5Z0 425 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 KYQ8NBH2 561 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 BHMTQ93088 406 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZNF558Q96NG5 402 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 JMJD4Q9H9V9 463 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 MRPL17Q9NRX2 175 aaKnown RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ABI3Q9P2A4 366 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 B2RBV5 119 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 CACNB4O00305 520 aaPredicted RBP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 ZBTB14O43829 449 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 HNRNPCP07910 306 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCN3A-201ENST00000283254 FGRP09769 529 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TYMPP19971 482 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 TKTL1P51854 596 aa4.16□□□□□ -1.74
SCN3A-201ENST00000283254 RCN1Q15293 331 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms