RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 WDR43Q15061 677 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD44-202ENST00000278385 BAK1Q16611 211 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 C2orf76Q3KRA6 126 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PRAMEF9Q5VWM5 478 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 CATSPERGQ6ZRH7 1159 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PXKQ7Z7A4 578 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 TMEM110Q86TL2 294 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 TAGAPQ8N103 731 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ADSSL1Q8N142 457 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 TTC39CQ8N584 583 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 SRBD1Q8N5C6 995 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 ZCCHC14Q8WYQ9 949 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 HSPH1Q92598 858 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 USP6NLQ92738 828 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ITFG2Q969R8 447 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 IQCDQ96DY2 449 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 VPS39Q96JC1 886 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 CNDP1Q96KN2 507 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PPP1R13BQ96KQ4 1090 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 DACH2Q96NX9 599 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 FOXB1Q99853 325 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 NTPCRQ9BSD7 190 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 NT5C3AQ9H0P0 336 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 XYLT2Q9H1B5 865 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 COPS7BQ9H9Q2 264 aaPredicted RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 SEPSECSQ9HD40 501 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 NECTIN3Q9NQS3 549 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 COL20A1Q9P218 1284 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 TBC1D14Q9P2M4 693 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 EXTL2Q9UBQ6 330 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 PSAT1Q9Y617 370 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 CFAP20Q9Y6A4 193 aaKnown RBP4.88□□□□□ -1.63
CD44-202ENST00000278385 PIAS3Q9Y6X2 628 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 C5P01031 1676 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 C10orf71Q711Q0 1435 aa4.88□□□□□ -1.63
CD44-202ENST00000278385 ZNF831Q5JPB2 1677 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ARID1BQ8NFD5 2236 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 A0A0G2JNJ9 132 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ARHGAP10A1A4S6 786 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 KRT87PA6NCN2 255 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 NPEPPSL1A6NEC2 478 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 HMX3A6NHT5 357 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 A8MVJ9 347 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PTGES3LE9PB15 166 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 H0YIN7 160 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 VILLO15195 856 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 THAP12O43422 761 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 LAMTOR5O43504 91 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 CAMTA2O94983 1202 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 AFPP02771 609 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 TK1P04183 234 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ITGA2BP08514 1039 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 CLEC2LP0C7M8 214 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 HSPA1AP0DMV8 641 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 HSPA1BP0DMV9 641 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 MYL4P12829 197 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PTPN2P17706 415 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PSMA4P25789 261 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 EEF1DP29692 281 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 ADCY8P40145 1251 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TMPOP42166 694 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 KCNQ1P51787 676 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 HK3P52790 923 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PNLIPRP1P54315 467 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PRKAA2P54646 552 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 RRP1P56182 461 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 YBEYP58557 167 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 C1QTNF8P60827 252 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 EIF4A1P60842 406 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 SLC6A3Q01959 620 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ACAP1Q15027 740 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 EPHA7Q15375 998 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 CEP55Q53EZ4 464 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TBC1D9BQ66K14 1250 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 SLFN12LQ6IEE8 588 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TAF2Q6P1X5 1199 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 SLC2A7Q6PXP3 512 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 KLHL17Q6TDP4 642 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 DENND5BQ6ZUT9 1274 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 CPLX4Q7Z7G2 160 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 GLRX5Q86SX6 157 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 PHYKPLQ8IUZ5 450 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 OR52K2Q8NGK3 314 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 CTCFLQ8NI51 663 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 KCNG4Q8TDN1 519 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 GRK7Q8WTQ7 553 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 DEPDC1BQ8WUY9 529 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 NRG4Q8WWG1 115 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TBC1D5Q92609 795 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms