RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RPS6P62753 249 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PRKCEQ02156 737 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 STEAP4Q687X5 459 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PHTF2Q8N3S3 785 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 TSPAN14Q8NG11 270 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 CNDP1Q96KN2 507 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 FBXO40Q9UH90 709 aa12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 PAIP2BQ9ULR5 123 aaKnown RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
CHMP2B-201ENST00000263780 GPR25O00155 361 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 TPP1O14773 563 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 GCATO75600 419 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 MLNP12872 115 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 GPD1P21695 349 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 PROZP22891 400 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 NUDT2P50583 147 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 DPYSQ14117 519 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 TAF5Q15542 800 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 ZBTB41Q5SVQ8 909 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 CDHR1Q96JP9 859 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 CCT7Q99832 543 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 PORCNQ9H237 461 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 MRPL40Q9NQ50 206 aaKnown RBP12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 H3BSA7 217 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 HSPA4LO95757 839 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 NUMBP49757 651 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 TUBA4AP68366 448 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 MTERF2Q49AM1 385 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 DHRS4L2Q6PKH6 230 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 PACS1Q6VY07 963 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 ZPBP2Q6X784 338 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 NAT9Q9BTE0 207 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 FAIMQ9NVQ4 179 aa12.73□□□□□ -0.37
CHMP2B-201ENST00000263780 AIM2O14862 343 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 TRPA1O75762 1119 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ALDOAP04075 364 aaKnown RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ME2P23368 584 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 MRPS22P82650 360 aaKnown RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 SLC44A4Q53GD3 710 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 C6orf52Q5T4I8 152 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 TRIM67Q6ZTA4 783 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 DSELQ8IZU8 1212 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 STON2Q8WXE9 905 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 LENG8Q96PV6 779 aaPredicted RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 CPXM1Q96SM3 734 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 CDRT15Q96T59 188 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 COPS7BQ9H9Q2 264 aaPredicted RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 TCF7L2Q9NQB0 619 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNHIT2Q9UHR6 403 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PRSS51A0A1B0GVH4 220 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ERBB2P04626 1255 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ZFXP17010 805 aaPredicted RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 GLDCP23378 1020 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PIK3R1P27986 724 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ACADVLP49748 655 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 CBX3Q13185 183 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 HERC3Q15034 1050 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 ZNF423Q2M1K9 1284 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PIGGQ5H8A4 983 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 KLHL35Q6PF15 583 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 LPCAT2Q7L5N7 544 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PGAM4Q8N0Y7 254 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 JDP2Q8WYK2 163 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PRMT6Q96LA8 375 aaPredicted RBP12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 TBCBQ99426 244 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 OSBPL11Q9BXB4 747 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 PCDH18Q9HCL0 1135 aa12.72□□□□□ -0.37
CHMP2B-201ENST00000263780 WDR46O15213 610 aaKnown RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 ZBTB14O43829 449 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 TBC1D12O60347 775 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 KLHL41O60662 606 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 ZMPSTE24O75844 475 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 BCAS2O75934 225 aaPredicted RBP12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 TNNC2P02585 160 aa12.71□□□□□ -0.37
CHMP2B-201ENST00000263780 PCSK6P29122 969 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms