RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MTMR14Q8NCE2 650 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SH3TC2Q8TF17 1288 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 PEBP4Q96S96 227 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 SDCBP2Q9H190 292 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 STAP1Q9ULZ2 295 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 ATP8B3O60423 1300 aa16.65■□□□□ 0.26
PDZRN3-201ENST00000263666 MAGEA13PA6NCF6 341 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 ASPAP45381 313 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 TPD52P55327 224 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 MRPS22P82650 360 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 POU6F1Q14863 301 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 NOMO1Q15155 1222 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 KIF19Q2TAC6 998 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 FSD1LQ9BXM9 530 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 MROH8Q9H579 483 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 XPNPEP3Q9NQH7 507 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 CHST12Q9NRB3 414 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 CACNG4Q9UBN1 327 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 GLTPD2A6NH11 291 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 ARF4P18085 180 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 DLG2Q15700 870 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 ARMCX2Q7L311 632 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 GMLQ99445 158 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 PIDD1Q9HB75 910 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 XIRP1Q702N8 1843 aaKnown RBP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 TYROBPO43914 113 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 MSCO60682 206 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 ARIH2O95376 493 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 ANPEPP15144 967 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 TFE3P19532 575 aaPredicted RBP16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 FLOT2Q14254 428 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 TMEM259Q4ZIN3 620 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 HPS6Q86YV9 775 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 SNX31Q8N9S9 440 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 PCDH19Q8TAB3 1148 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 OMDQ99983 421 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 VCX3AQ9NNX9 186 aa16.64■□□□□ 0.25
PDZRN3-201ENST00000263666 MOGSQ13724 837 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 SYT15Q9BQS2 421 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 TMEM134Q9H6X4 195 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 CPSF3Q9UKF6 684 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 GLRA3O75311 464 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 HOXC6P09630 235 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 CCNB1P14635 433 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 PDE1CQ14123 709 aaPredicted RBP16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 PDK2Q15119 407 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 MFSD14CQ5VZR4 134 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 TRIM67Q6ZTA4 783 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 LCA5Q86VQ0 697 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 PIWIL2Q8TC59 973 aaKnown RBP16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 GDPD5Q8WTR4 605 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 Q9H521 79 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 THAP1Q9NVV9 213 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 AURKCQ9UQB9 309 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 PLLPQ9Y342 182 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 T-ENOLP0DO92 83 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 TSPAN8P19075 237 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 SLC6A3Q01959 620 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 TAF12Q16514 161 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 SNX32Q86XE0 403 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 TREML1Q86YW5 311 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 CMTM5Q96DZ9 223 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 SUDS3Q9H7L9 328 aaPredicted RBP16.63■□□□□ 0.25
PDZRN3-201ENST00000263666 A0A096LPK6 155 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 KIF3CO14782 793 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 PPEF2O14830 753 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 PPP1R12AO14974 1030 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 KLHL2O95198 593 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 FGFR3P22607 806 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 GCAP28676 217 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 EPHA3P29320 983 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SPRP35270 261 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 RTP1P59025 263 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SPDYAQ5MJ70 313 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SERPINI1Q99574 410 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 DDX18Q9NVP1 670 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 GOLGA8CPA6NN73 597 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 ITM2AO43736 263 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TCEA3O75764 348 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 ZFXP17010 805 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 FOXD4Q12950 439 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 MYLK4Q86YV6 388 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TBCBQ99426 244 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 PLEKHA5Q9HAU0 1116 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 CLIC5Q9NZA1 410 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 DTNAQ9Y4J8 743 aa16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 USP2O75604 605 aaPredicted RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 OAS1P00973 400 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 SLC25A11Q02978 314 aaKnown RBP16.62■□□□□ 0.25
PDZRN3-201ENST00000263666 TRMT5Q32P41 509 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms