RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CHD2O14647 1828 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 KCNK1O00180 336 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 H2AFYO75367 372 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 DSG3P32926 999 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 CCR3P51677 355 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 KCNK10P57789 538 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 C15orf59Q2T9L4 293 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 VWA5B1Q5TIE3 1220 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 C10orf107Q8IVU9 208 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 CCDC103Q8IW40 242 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 BBS5Q8N3I7 341 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 RNF139Q8WU17 664 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 SERAC1Q96JX3 654 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 MAGEB5Q9BZ81 275 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 POLR1BQ9H9Y6 1135 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 CFAP99D6REC4 459 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 MTA2O94776 668 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 CBX3Q13185 183 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 FASTKQ14296 549 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 PCSK7Q16549 785 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 ACOT1Q86TX2 421 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 ENDOVQ8N8Q3 282 aaKnown RBP16.61■□□□□ 0.25
SREBF1-201ENST00000261646 GLMNQ92990 594 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 ITFG2Q969R8 447 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 C7orf26Q96N11 449 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 PLEKHG4BQ96PX9 1271 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 KIF17Q9P2E2 1029 aa16.61■□□□□ 0.25
SREBF1-201ENST00000261646 MAFGO15525 162 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 DDHD2O94830 711 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 TPH1P17752 444 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 S100A5P33763 92 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 GPR107Q5VW38 600 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 TDRD10Q5VZ19 366 aaKnown RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 DHRSXQ8N5I4 330 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 RDM1Q8NG50 284 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 SLC7A6OSQ96CW6 309 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 PLEKHA5Q9HAU0 1116 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 KCPQ6ZWJ8 1503 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 SIN3BO75182 1162 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 TSHRP16473 764 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 NAMPTP43490 491 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 ZACNQ401N2 412 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 CDCA2Q69YH5 1023 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 WDR55Q9H6Y2 383 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 NSMCE4AQ9NXX6 385 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 KPNA4O00629 521 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 PHGDHO43175 533 aaKnown RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 VDRP11473 427 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 PERM1Q5SV97 790 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 ANGEL2Q5VTE6 544 aaKnown RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 NAPEPLDQ6IQ20 393 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 SYTL5Q8TDW5 730 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 NKD2Q969F2 451 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 ATAD3AQ9NVI7 634 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 TDRKHQ9Y2W6 561 aaKnown RBP16.6■□□□□ 0.25
SREBF1-201ENST00000261646 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
SREBF1-201ENST00000261646 BIRC5O15392 142 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CBFA2T3O75081 653 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PMPCBO75439 489 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PPARGP37231 505 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CAP2P40123 477 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 HADHAP40939 763 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 KLF10Q13118 480 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CSHL1Q14406 222 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 GLIS1Q8NBF1 620 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 TIMMDC1Q9NPL8 285 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 SELENONQ9NZV5 590 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 A6NHS1 94 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 MAGEB2O15479 319 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PTPN7P35236 360 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 RPL14P50914 215 aaKnown RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 TAF5Q15542 800 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 ANGPTL8Q6UXH0 198 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 NANOGNBQ7Z5D8 188 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 MYO1HQ8N1T3 1032 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 FAM47BQ8NA70 645 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 DMAC2Q9NW81 257 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CPSF3Q9UKF6 684 aaKnown RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 POLIQ9UNA4 740 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 POMPQ9Y244 141 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 SIGLEC16A6NMB1 481 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 M0QZ92 97 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 FDX1P10109 184 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 HSD17B4P51659 736 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 RGS21Q2M5E4 152 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 WDR49Q8IV35 697 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms