RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 KLHL23Q8NBE8 558 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 HNRNPLLQ8WVV9 542 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 DCLK3Q9C098 648 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM206Q9H813 350 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 CDC23Q9UJX2 597 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PPFIA2O75334 1257 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 CCR10P46092 362 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 RNASE9P60153 205 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 FILIP1LQ4L180 1135 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ODF2Q5BJF6 829 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 NME8Q8N427 588 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ARHGEF39Q8N4T4 335 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 RFFLQ8WZ73 363 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 C11orf24Q96F05 449 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 NUP85Q9BW27 656 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 UBFD1O14562 309 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ADAM23O75077 832 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 LRIG2O94898 1065 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 MYL3P08590 195 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 DHRS4L1P0CG22 281 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 GIMD1P0DJR0 217 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 HLA-FP30511 346 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 MSANTD2Q6P1R3 559 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 DRICH1Q6PGQ1 229 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 MTERF4Q7Z6M4 381 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 CLEC14AQ86T13 490 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 PLD6Q8N2A8 252 aaKnown RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 DCAKDQ8WVC6 231 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 RXFP2Q8WXD0 754 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 ARGLU1Q9NWB6 273 aaPredicted RBP5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC2A6Q9UGQ3 507 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 INTUQ9ULD6 942 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 SNX9Q9Y5X1 595 aa5.88□□□□□ -1.47
TOPBP1-201ENST00000260810 GRXCR2A6NFK2 248 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CES2O00748 559 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RTN2O75298 545 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ERLIN2O94905 339 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RARBP10826 455 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CHRNA4P43681 627 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 LIG4P49917 911 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ADIGQ0VDE8 80 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 TUSC3Q13454 348 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 GRIN2CQ14957 1233 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CAPZA3Q96KX2 299 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 METTL5Q9NRN9 209 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ITGA11Q9UKX5 1188 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 STK24Q9Y6E0 443 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 SPTBN2O15020 2390 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 HELZ2Q9BYK8 2649 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 PCNX2A6NKB5 2137 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 STC2O76061 302 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 MLYCDO95822 493 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RPL22P35268 128 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CRADDP78560 199 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 MDGA1Q8NFP4 955 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 EDEM1Q92611 657 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 SPAG5Q96R06 1193 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ACE2Q9BYF1 805 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF358Q9NW07 568 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CNOT6Q9ULM6 557 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 A0A1W2PPM1 405 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 AREL1O15033 823 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 FGFR1OPO95684 399 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 MTHFD2P13995 350 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 GKP32189 559 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 TTLL12Q14166 644 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ACAP2Q15057 778 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RNF208Q9H0X6 261 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 OSBPL2Q9H1P3 480 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RABGEF1Q9UJ41 708 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 GUCA1BQ9UMX6 200 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RIF1Q5UIP0 2472 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 PER2O15055 1255 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CETN3O15182 167 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 INSIG1O15503 277 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 LDB2O43679 373 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 C1RP00736 705 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CSH1P0DML2 217 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CSH2P0DML3 217 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 POU3F3P20264 500 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 CPT1AP50416 773 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 XIAPP98170 497 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 C6orf89Q6UWU4 347 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 RANBP10Q6VN20 620 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 NAPRTQ6XQN6 538 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 Q7L0L9 218 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC13A5Q86YT5 568 aaPredicted RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 FMNL3Q8IVF7 1028 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 SPATA22Q8NHS9 363 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 DQX1Q8TE96 717 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 FOXJ1Q92949 421 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 NAP1L4Q99733 375 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 ACSS2Q9NR19 701 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 PNMA2Q9UL42 364 aa5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 LUC7L2Q9Y383 392 aaKnown RBP5.87□□□□□ -1.47
TOPBP1-201ENST00000260810 MROH6A6NGR9 719 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 DAPK3O43293 454 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 CBFA2T2O43439 604 aa5.86□□□□□ -1.47
TOPBP1-201ENST00000260810 MT-CYBP00156 380 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms