RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 SALL3Q9BXA9 1300 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 GRM6O15303 877 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 SNAI1O95863 264 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-201ENST00000259008 PTPN3P26045 913 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 ABL2P42684 1182 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 MNAT1P51948 309 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 NCKAP1LP55160 1127 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 UGP2Q16851 508 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 CCDC38Q502W7 563 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 TFDP3Q5H9I0 405 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 GRASPQ7Z6J2 395 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-201ENST00000259008 UNC93AQ86WB7 457 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 SYTL1Q8IYJ3 562 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 ALLCQ8N6M5 410 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 TRMT61BQ9BVS5 477 aaKnown RBP6.53□□□□□ -1.36
BRIP1-201ENST00000259008 SHCBP1LQ9BZQ2 653 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 C2CD2Q9Y426 696 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 GRID2IPA4D2P6 1211 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 MYADML2A6NDP7 307 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 GTF2BQ00403 316 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 CDC16Q13042 620 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 DHX34Q14147 1143 aaKnown RBP6.53□□□□□ -1.36
BRIP1-201ENST00000259008 RFWD3Q6PCD5 774 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 SARM1Q6SZW1 724 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 SPPL2BQ8TCT7 592 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 RAD9AQ99638 391 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 CACNA2D2Q9NY47 1150 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 KIAA1522Q9P206 1035 aaPredicted RBP6.53□□□□□ -1.36
BRIP1-201ENST00000259008 TBC1D14Q9P2M4 693 aa6.53□□□□□ -1.36
BRIP1-201ENST00000259008 RASGRP1O95267 797 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 GNSP15586 552 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 GJA9P57773 515 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SP2Q02086 613 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 FAM47EQ6ZV65 393 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 RRM2BQ7LG56 351 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CYP4X1Q8N118 509 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 C10orf53Q8N6V4 93 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 HERVK_113Q902F9 699 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MPP6Q9NZW5 540 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SIRPGQ9P1W8 387 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CALCOCO1Q9P1Z2 691 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 VAV3Q9UKW4 847 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 VPS9D1Q9Y2B5 631 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ADGRG1Q9Y653 693 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ROBO3Q96MS0 1386 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SLC38A8A6NNN8 435 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SPATA31C1P0DKV0 1188 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ALKBH2Q6NS38 261 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 LCA5Q86VQ0 697 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 WDR75Q8IWA0 830 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PXYLP1Q8TE99 480 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 C7orf43Q8WVR3 580 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 KLK6Q92876 244 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CLIP3Q96DZ5 547 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SLC9A7Q96T83 725 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ZYG11BQ9C0D3 744 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 APOBEC2Q9Y235 224 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 FAM47E-STBD1D6RA91 191 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MYL2P10916 166 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SLC5A3P53794 718 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 KYNUQ16719 465 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MAP3K21Q5TCX8 1036 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CRTC3Q6UUV7 619 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SPOCD1Q6ZMY3 1216 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 NETO2Q8NC67 525 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 GDPD5Q8WTR4 605 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SETD7Q8WTS6 366 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 KCNB2Q92953 911 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 STAMBPL1Q96FJ0 436 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 FERD3LQ96RJ6 166 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TMEM121Q9BTD3 319 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 RHOBTB2Q9BYZ6 727 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 DPEP3Q9H4B8 488 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ZCCHC17Q9NP64 241 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 INTUQ9ULD6 942 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CPQQ9Y646 472 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 RPS6KL1Q9Y6S9 549 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 A0A1W2PQJ5 194 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CACNB4O00305 520 aaPredicted RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 SYN3O14994 580 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 OR56A5P0C7T3 313 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CD86P42081 329 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 MROH9Q5TGP6 573 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 CST9Q5W186 159 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PRPF39Q86UA1 669 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 LENG9Q96B70 501 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ABCG8Q9H221 673 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 TNKS2Q9H2K2 1166 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ATP13A3Q9H7F0 1226 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 ACP6Q9NPH0 428 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 NSMCE4AQ9NXX6 385 aa6.52□□□□□ -1.37
BRIP1-201ENST00000259008 UTP6Q9NYH9 597 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 PPARGC1AQ9UBK2 798 aaKnown RBP6.52□□□□□ -1.37
BRIP1-201ENST00000259008 INVSQ9Y283 1065 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms