RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 SIGLEC10Q96LC7 697 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 ZMAT2Q96NC0 199 aaKnown RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 CSPG4P5Q96PW8 444 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 KCNK4Q9NYG8 393 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 DTLQ9NZJ0 730 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 SPAG6O75602 509 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 AP1G2O75843 785 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 LGALS2P05162 132 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 PDK2Q15119 407 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 RNF135Q8IUD6 432 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 ZNF398Q8TD17 642 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 USP13Q92995 863 aaPredicted RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
VHL-201ENST00000256474 PTPRHQ9HD43 1115 aa13.9□□□□□ -0.18
VHL-201ENST00000256474 PFKMP08237 780 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 TGFB3P10600 412 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 CHSY1Q86X52 802 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 CCNYL1Q8N7R7 359 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 DCPSQ96C86 337 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 CELF6Q96J87 481 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 SIK2Q9H0K1 926 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 MT-CO1P00395 513 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 VAV1P15498 845 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 LCLAT1Q6UWP7 414 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 OLFML1Q6UWY5 402 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PNPLA1Q8N8W4 532 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PIWIL2Q8TC59 973 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 LRRC4Q9HBW1 653 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 GBA2Q9HCG7 927 aaPredicted RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 SLC39A10Q9ULF5 831 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 HMX2A2RU54 273 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 RALBP11234 206 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 GNL1P36915 607 aaPredicted RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 STRA8Q7Z7C7 330 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 DCLK2Q8N568 766 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 SLC7A14Q8TBB6 771 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PLAC1Q9HBJ0 212 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 KRT82Q9NSB4 513 aa13.89□□□□□ -0.19
VHL-201ENST00000256474 PIN4Q9Y237 131 aaKnown RBP13.89□□□□□ -0.19
VHL-201ENST00000256474 SDR42E2A6NKP2 422 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PHGDHO43175 533 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 HNRNPCL1O60812 293 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 C22orf31O95567 290 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 DHRS4L1P0CG22 281 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 L1CAMP32004 1257 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 COPAP53621 1224 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 STILQ15468 1287 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 SPDYAQ5MJ70 313 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PACS1Q6VY07 963 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 ENDOVQ8N8Q3 282 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 EDEM1Q92611 657 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 P2RY11Q96G91 374 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 C12orf42Q96LP6 360 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 FGD4Q96M96 766 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 SSU72Q9NP77 194 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 THAP1Q9NVV9 213 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 MKI67P46013 3256 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 H3BRB1 525 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 ENO3P13929 434 aaPredicted RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 ACADSP16219 412 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 TGM2P21980 687 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PKNOX1P55347 436 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 IRF9Q00978 393 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PDPK2PQ6A1A2 396 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 SNX31Q8N9S9 440 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.88□□□□□ -0.193e-8■□□□□ 10.1
VHL-201ENST00000256474 PIP4K2CQ8TBX8 421 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 TUT1Q9H6E5 874 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 ARHGEF4Q9NR80 690 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 BRWD3Q6RI45 1802 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 AMHP03971 560 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 ALDOAP04075 364 aaKnown RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 ITGA2BP08514 1039 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 CD1EP15812 388 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 SOX11P35716 441 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 OCRLQ01968 901 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 PTAR1Q7Z6K3 402 aaPredicted RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 LENG1Q96BZ8 264 aaPredicted RBP13.88□□□□□ -0.19
VHL-201ENST00000256474 MFSD3Q96ES6 412 aa13.88□□□□□ -0.19
VHL-201ENST00000256474 FERMT1Q9BQL6 677 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms