RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 EPAS1Q99814 870 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 TMEM121Q9BTD3 319 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 CCSER2Q9H7U1 834 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 FAM114A2Q9NRY5 505 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 UXTQ9UBK9 157 aaPredicted RBP9.79□□□□□ -0.84
NIP7-202ENST00000254941 NFU1Q9UMS0 254 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 HEY1Q9Y5J3 304 aa9.79□□□□□ -0.84
NIP7-202ENST00000254941 HIDE1A8MVS5 230 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 PAGE1O75459 146 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 IGLV3-27P01718 113 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 CA3P07451 260 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 SPATA31D3P0C874 917 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 IVDP26440 423 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 KLRC2P26717 231 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 RPL21P46778 160 aaKnown RBP9.78□□□□□ -0.84
NIP7-202ENST00000254941 TUBP50607 506 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 KPNA1P52294 538 aaPredicted RBP9.78□□□□□ -0.84
NIP7-202ENST00000254941 TBX4P57082 545 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 TPI1P60174 286 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 RING1Q06587 406 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 CAMK1Q14012 370 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 TRIP4Q15650 581 aaPredicted RBP9.78□□□□□ -0.84
NIP7-202ENST00000254941 PLPP4Q5VZY2 271 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 NCBP2-AS2Q69YL0 99 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 EMBQ6PCB8 327 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 C1orf228Q6PIY5 440 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 SPATA31D4Q6ZUB0 917 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 CCDC149Q6ZUS6 474 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 GSTA5Q7RTV2 222 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 TADA2BQ86TJ2 420 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 ITIH5Q86UX2 942 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 GSPT2Q8IYD1 628 aaKnown RBP9.78□□□□□ -0.84
NIP7-202ENST00000254941 CCDC89Q8N998 374 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 FCRL2Q96LA5 508 aaPredicted RBP9.78□□□□□ -0.84
NIP7-202ENST00000254941 C1orf74Q96LT6 269 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 TRIM31Q9BZY9 425 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 DPH5Q9H2P9 285 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 ETNK2Q9NVF9 386 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 ZNF446Q9NWS9 450 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 TRPM5Q9NZQ8 1165 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 DNMT3LQ9UJW3 386 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 ASB3Q9Y575 518 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 PCDHA11Q9Y5I1 949 aa9.78□□□□□ -0.84
NIP7-202ENST00000254941 SGK1O00141 431 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 DCLK1O15075 740 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 GRM6O15303 877 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 LRIG2O94898 1065 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 GLUD1P00367 558 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 C1RP00736 705 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 STIP1P31948 543 aaKnown RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 HTR7P34969 479 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 NRG1Q02297 640 aaPredicted RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 GBE1Q04446 702 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 SLC10A2Q12908 348 aaPredicted RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 XRCC4Q13426 336 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 HLTFQ14527 1009 aaKnown RBP eCLIP9.77□□□□□ -0.85
NIP7-202ENST00000254941 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 HECTD3Q5T447 861 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 MANEALQ5VSG8 457 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 BZW1Q7L1Q6 419 aaKnown RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 RTL10Q7L3V2 364 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 MIB1Q86YT6 1006 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 KREMEN2Q8NCW0 462 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 CCHCR1Q8TD31 782 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 TGS1Q96RS0 853 aaKnown RBP9.77□□□□□ -0.85
NIP7-202ENST00000254941 FAM129AQ9BZQ8 928 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 ZDHHC18Q9NUE0 388 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 GRHL1Q9NZI5 618 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 DTLQ9NZJ0 730 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 SNX24Q9Y343 169 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 NOTCH4Q99466 2003 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 CHD5Q8TDI0 1954 aa9.77□□□□□ -0.85
NIP7-202ENST00000254941 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 SEC31AO94979 1220 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 KRT14P02533 472 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 APOEP02649 317 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 C8AP07357 584 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ERCC2P18074 760 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 HOXC13P31276 330 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 CLCN4P51793 760 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 MLLT6P55198 1093 aaPredicted RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 ERVK-21P61565 698 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 MTA1Q13330 715 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ARTNQ5T4W7 220 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ACBD5Q5T8D3 534 aaPredicted RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 TMEM150AQ86TG1 271 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ZC3H18Q86VM9 953 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 GLIS1Q8NBF1 620 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 MICAL1Q8TDZ2 1067 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 BTN2A3PQ96KV6 586 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 OLFM3Q96PB7 478 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 SIK2Q9H0K1 926 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 PCDH9Q9HC56 1237 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 WHRNQ9P202 907 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 ASIC3Q9UHC3 531 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 NEU3Q9UQ49 428 aa9.76□□□□□ -0.85
NIP7-202ENST00000254941 HBS1LQ9Y450 684 aaKnown RBP9.76□□□□□ -0.85
NIP7-202ENST00000254941 MFHAS1Q9Y4C4 1052 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms