RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 NEK3P51956 506 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 CRADDP78560 199 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 CDHR3Q6ZTQ4 885 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 SUGP1Q8IWZ8 645 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 MCUQ8NE86 351 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 RNF139Q8WU17 664 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 APOPT1Q96IL0 206 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 NPY6RQ99463 290 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 TSEN34Q9BSV6 310 aaKnown RBP19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 RHOBTB2Q9BYZ6 727 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 NPHS2Q9NP85 383 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ANLNQ9NQW6 1124 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM105AQ9NUU6 356 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 PADI3Q9ULW8 664 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 FYNP06241 537 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ANKRD20A2Q5SQ80 823 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ANKRD20A1Q5TYW2 823 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ANKRD20A3Q5VUR7 823 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 LRRC6Q86X45 466 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 GBP7Q8N8V2 638 aaPredicted RBP19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 C10orf82Q8WW14 230 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ERP27Q96DN0 273 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 FRMD8Q9BZ67 464 aaPredicted RBP19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 ULBP1Q9BZM6 244 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 SEPT10Q9P0V9 454 aa19.3■□□□□ 0.68
PDLIM4-201ENST00000253754 YJEFN3A6XGL0 299 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 E7ENQ6 273 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM72CH0Y354 149 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 APOEP02649 317 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM200BP0CF97 657 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 PRKCHP24723 683 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 NOS2P35228 1153 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 AP1B1Q10567 949 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 PLEKHG4Q58EX7 1191 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM72AQ5TYM5 149 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM72DQ6L9T8 149 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM72BQ86X60 149 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 UNC5BQ8IZJ1 945 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 NT5C3BQ969T7 300 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 TTC17Q96AE7 1141 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 ALKBH8Q96BT7 664 aaKnown RBP19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 TSPAN18Q96SJ8 248 aa19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.29■□□□□ 0.68
PDLIM4-201ENST00000253754 CASTOR2A6NHX0 329 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 I3L4J1 428 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 I6L893 689 aaPredicted RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 TPSB2P20231 275 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 ETV4P43268 484 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SLC18A2Q05940 514 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SEMA5AQ13591 1074 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 TPSAB1Q15661 275 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SMAD1Q15797 465 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 TTC39BQ5VTQ0 682 aaPredicted RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 BNIPLQ7Z465 357 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SLC7A14Q8TBB6 771 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 PCED1BQ96HM7 432 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SMOQ99835 787 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 EBNA1BP2Q99848 306 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 UNC93B1Q9H1C4 597 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 CHST12Q9NRB3 414 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SLC17A6Q9P2U8 582 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 FRMPD3Q5JV73 1810 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 A0A0A0MRY4 1105 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 MGRN1O60291 552 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 AP1G2O75843 785 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 ALADP13716 330 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 NQO1P15559 274 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SCNN1GP51170 649 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 DEUP1Q05D60 604 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 CBLBQ13191 982 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 TRIM71Q2Q1W2 868 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 KCTD13Q8WZ19 329 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 KLHL29Q96CT2 875 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 P2RY11Q96G91 374 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SPATA13Q96N96 652 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SLC2A13Q96QE2 648 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 SYT15Q9BQS2 421 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 DNAI2Q9GZS0 605 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 MANSC1Q9H8J5 431 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 USH1CQ9Y6N9 552 aa19.28■□□□□ 0.68
PDLIM4-201ENST00000253754 RNF103O00237 685 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 LPIN1Q14693 890 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 SNCBQ16143 134 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 PAN2Q504Q3 1202 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 FAM35AQ86V20 835 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 PDCD7Q8N8D1 485 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 COLGALT1Q8NBJ5 622 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 CCNYQ8ND76 341 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 ZMIZ2Q8NF64 920 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 RFWD2Q8NHY2 731 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 DCTN4Q9UJW0 460 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 NUMBLQ9Y6R0 609 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 WDR27A2RRH5 827 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 ARL5CA6NH57 179 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 THP07101 528 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 USP17L7P0C7H9 530 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 BSPRYQ5W0U4 402 aa19.27■□□□□ 0.68
PDLIM4-201ENST00000253754 SRPK1Q96SB4 655 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms