RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 MAGEB5Q9BZ81 275 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 USP29Q9HBJ7 922 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 ANLNQ9NQW6 1124 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 LZTS1Q9Y250 596 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 SLC4A7Q9Y6M7 1214 aa14.67□□□□□ -0.06
SDF2-201ENST00000247020 C2CD2LO14523 706 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 PPP1R12AO14974 1030 aaPredicted RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 FGF10O15520 208 aaPredicted RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 OPA1O60313 960 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 SOAT2O75908 522 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 ERCC2P18074 760 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 RPL17P18621 184 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 ALDH1A3P47895 512 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 PGFP49763 221 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 PMS2P54278 862 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 GDF10P55107 478 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 EIF3BP55884 814 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 PLD1Q13393 1074 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 VEPH1Q14D04 833 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 RNASEH2BQ5TBB1 312 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 KLHDC10Q6PID8 442 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 TRMT10CQ7L0Y3 403 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 PPIL6Q8IXY8 311 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 ATP6V0D2Q8N8Y2 350 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 GLIS1Q8NBF1 620 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 ADAM7Q9H2U9 754 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 PABPC3Q9H361 631 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 TMPRSS4Q9NRS4 437 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 UXTQ9UBK9 157 aaPredicted RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 SFMBT1Q9UHJ3 866 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 SLC12A6Q9UHW9 1150 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 HBS1LQ9Y450 684 aaKnown RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
SDF2-201ENST00000247020 YIPF1Q9Y548 306 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 DOCK4Q8N1I0 1966 aa14.66□□□□□ -0.06
SDF2-201ENST00000247020 ANAPC1Q9H1A4 1944 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 OBSL1O75147 1896 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 CLUHO75153 1309 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 FAM72CH0Y354 149 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 MFSD11O43934 449 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 LRIG2O94898 1065 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 SEC24AO95486 1093 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 APOEP02649 317 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 NUDT17P0C025 328 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 ELF1P32519 619 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 RPL22P35268 128 aaKnown RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 VPS41P49754 854 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 TUBP50607 506 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 TBX4P57082 545 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 GBE1Q04446 702 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 ZNF33AQ06730 810 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 SLC10A2Q12908 348 aaPredicted RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 UAP1Q16222 522 aaPredicted RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 FAM72AQ5TYM5 149 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 RASIP1Q5U651 963 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 MANEALQ5VSG8 457 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 HEATR6Q6AI08 1181 aaKnown RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 FAM72DQ6L9T8 149 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 FAM72BQ86X60 149 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 LZTR1Q8N653 840 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 GOLGA6L1Q8N7Z2 621 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 FAM71DQ8N9W8 422 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 TFB1MQ8WVM0 346 aaKnown RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 FCRL2Q96LA5 508 aaPredicted RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 ZIM3Q96PE6 472 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 SH3GL2Q99962 352 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 FRMD8Q9BZ67 464 aaPredicted RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 CATSPERBQ9H7T0 1116 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 ETNK2Q9NVF9 386 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 DONSONQ9NYP3 566 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 ATP8A1Q9Y2Q0 1164 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 IRAK3Q9Y616 596 aa14.65□□□□□ -0.06
SDF2-201ENST00000247020 MTCL1Q9Y4B5 1905 aaKnown RBP14.65□□□□□ -0.06
SDF2-201ENST00000247020 C5orf60A6NFR6 353 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 AGPSO00116 658 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 EIF3HO15372 352 aaKnown RBP eCLIP14.64□□□□□ -0.07
SDF2-201ENST00000247020 KCNN4O15554 427 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 PAGE1O75459 146 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 GCATO75600 419 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 ETS1P14921 441 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MX2P20592 715 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 RBL1P28749 1068 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 CBLBQ13191 982 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 PRKD1Q15139 912 aaPredicted RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 STKLD1Q8NE28 680 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 GPR152Q8TDT2 470 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 GIPC2Q8TF65 315 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 UBLCP1Q8WVY7 318 aaPredicted RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 MARCH2Q9P0N8 246 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 CXXC1Q9P0U4 656 aaPredicted RBP14.64□□□□□ -0.07
SDF2-201ENST00000247020 ASB3Q9Y575 518 aa14.64□□□□□ -0.07
SDF2-201ENST00000247020 DENND4CQ5VZ89 1909 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms