RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SPDYE1Q8NFV5 336 aaPredicted RBP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 ZNF395Q9H8N7 513 aaPredicted RBP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 RNF19AQ9NV58 838 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 ZFATQ9P243 1243 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 MFSD11O43934 449 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 CAPN15O75808 1086 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 ATP5BP06576 529 aaKnown RBP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 PTDSS1P48651 473 aaKnown RBP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 FAM131BQ86XD5 332 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 DEFB106AQ8N104 65 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 ACMSDQ8TDX5 336 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 LGMNQ99538 433 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 OSMRQ99650 979 aa22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 HBS1LQ9Y450 684 aaKnown RBP22.29■■□□□ 1.16
SH2D3A-201ENST00000245908 SDR42E2A6NKP2 422 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 XPO1O14980 1071 aaKnown RBP22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 LINGO3P0C6S8 592 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 DARSP14868 501 aaKnown RBP22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 SULT1E1P49888 294 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 DNAI2Q9GZS0 605 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 RNF181Q9P0P0 153 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 SMIM28A0A1B0GU29 152 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 ENO4A6NNW6 628 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 OPHN1O60890 802 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 DAB1O75553 588 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 AKAP5P24588 427 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 PNPLA4P41247 253 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 ABL2P42684 1182 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 STX3Q13277 289 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 NAB1Q13506 487 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 ZNF618Q5T7W0 954 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 CCNJLQ8IV13 435 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 UNC5BQ8IZJ1 945 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 APOL6Q9BWW8 343 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 C20orf27Q9GZN8 174 aa22.28■■□□□ 1.16
SH2D3A-201ENST00000245908 SF3B1O75533 1304 aaKnown RBP eCLIP22.27■■□□□ 1.166e-13■■■■■ 155.1
SH2D3A-201ENST00000245908 STK10O94804 968 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 TKTP29401 623 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 GLUD2P49448 558 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 KPNB1Q14974 876 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 OTUD1Q5VV17 481 aaPredicted RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 TREML1Q86YW5 311 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 PDCD7Q8N8D1 485 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 SMC1BQ8NDV3 1235 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 APPL2Q8NEU8 664 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 THAP1Q9NVV9 213 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 PPARGC1AQ9UBK2 798 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 RNF103O00237 685 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 TOP3BO95985 862 aaKnown RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 GSRP00390 522 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 CDC25CP30307 473 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 TAF6P49848 677 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 AQP5P55064 265 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 WASHC5Q12768 1159 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 ACSBG2Q5FVE4 666 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 CASC4Q6P4E1 433 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 PACS1Q6VY07 963 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 BNIPLQ7Z465 357 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 APLFQ8IW19 511 aaPredicted RBP22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 ARHGAP24Q8N264 748 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 RNF139Q8WU17 664 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 ARNTL2Q8WYA1 636 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 CDKL2Q92772 493 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 STOML1Q9UBI4 398 aa22.27■■□□□ 1.16
SH2D3A-201ENST00000245908 F5H423 210 aaPredicted RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 H3BRJ5 948 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 PGAM1P18669 254 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 AXLP30530 894 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 CRADDP78560 199 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 XKR4Q5GH76 650 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 PIGZQ86VD9 579 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 ZC3H15Q8WU90 426 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 P2RY11Q96G91 374 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 TNIP3Q96KP6 325 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 EMCNQ9ULC0 261 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 ZNF638Q14966 1978 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 SMIM35A0A1B0GVV1 85 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 PDHXO00330 501 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 XPOTO43592 962 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 GLRA3O75311 464 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 ALDOAP04075 364 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 KITP10721 976 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 KCNE1P15382 129 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 ATP6V1C1P21283 382 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 MGAT1P26572 445 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 USP50Q70EL3 339 aaPredicted RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 TMPRSS6Q8IU80 811 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 NT5C3BQ969T7 300 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 MAML3Q96JK9 1138 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 TSPAN18Q96SJ8 248 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 YIPF3Q9GZM5 350 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 XPNPEP3Q9NQH7 507 aa22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 MARCOQ9UEW3 520 aaPredicted RBP22.26■■□□□ 1.15
SH2D3A-201ENST00000245908 MYO18AQ92614 2054 aaKnown RBP22.25■■□□□ 1.15
SH2D3A-201ENST00000245908 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.25■■□□□ 1.15
SH2D3A-201ENST00000245908 RAP1GDS1P52306 607 aa22.25■■□□□ 1.15
SH2D3A-201ENST00000245908 ADIGQ0VDE8 80 aa22.25■■□□□ 1.15
SH2D3A-201ENST00000245908 TBCCQ15814 346 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms