RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 PLK2Q9NYY3 685 aa11.03□□□□□ -0.64
PFDN5-201ENST00000243040 CALCOCO1Q9P1Z2 691 aa11.03□□□□□ -0.64
PFDN5-201ENST00000243040 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
PFDN5-201ENST00000243040 BZW2Q9Y6E2 419 aaKnown RBP11.03□□□□□ -0.64
PFDN5-201ENST00000243040 C2CD4BA6NLJ0 364 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 K7ESF4 209 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.656e-6■■■■■ 29.2
PFDN5-201ENST00000243040 TRIM24O15164 1050 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 ENDOD1O94919 500 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 MOCS2O96007 188 aaPredicted RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 F9P00740 461 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 TFE3P19532 575 aaPredicted RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 ABCB4P21439 1286 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 HOXA6P31267 233 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 HNRNPH3P31942 346 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 NBL1P41271 181 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 PTPN9P43378 593 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 CXCR3P49682 368 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 SGSHP51688 502 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 RNASE9P60153 205 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 TDRD12Q587J7 1177 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 MS4A13Q5J8X5 152 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 RFWD3Q6PCD5 774 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 VSTM4Q8IW00 320 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 SFTPA1Q8IWL2 248 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 MCOLN2Q8IZK6 566 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 HJURPQ8NCD3 748 aaPredicted RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 BHMTQ93088 406 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 TMA16Q96EY4 203 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 TBCBQ99426 244 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 SELENOOQ9BVL4 669 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 C2orf42Q9NWW7 574 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 SLC12A6Q9UHW9 1150 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 XPO7Q9UIA9 1087 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 MMP17Q9ULZ9 603 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 LUC7L2Q9Y383 392 aaKnown RBP11.02□□□□□ -0.65
PFDN5-201ENST00000243040 PAXBP1Q9Y5B6 917 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
PFDN5-201ENST00000243040 SYNJ2BP-COX16A0A087WUM0 186 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 GOLGA6L7A0A1B0GV03 622 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 FAM170AA1A519 330 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TYW5A2RUC4 315 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TBC1D3BA6NDS4 549 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 PRRT4C9JH25 899 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 PROB1E7EW31 1015 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TSPAN3O60637 253 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 SERPING1P05155 500 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 KRT3P12035 628 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TACR2P21452 398 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 SDC4P31431 198 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CASP14P31944 242 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 RDXP35241 583 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 PLA2G5P39877 138 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 NRLP54845 237 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 SEC13P55735 322 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CSTF1Q05048 431 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 DEUP1Q05D60 604 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 NME3Q13232 169 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 DMC1Q14565 340 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 EIF4HQ15056 248 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 C10orf76Q5T2E6 689 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TTC39BQ5VTQ0 682 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 RAP1GAP2Q684P5 730 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 DNAJC24Q6P3W2 148 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 ZC3H14Q6PJT7 736 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 STRADAQ7RTN6 431 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TRMT11Q7Z4G4 463 aaKnown RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CHSY1Q86X52 802 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 EMC1Q8N766 993 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 IL17RCQ8NAC3 791 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 JOSD2Q8TAC2 188 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 WFIKKN2Q8TEU8 576 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 ATOH1Q92858 354 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-201ENST00000243040 RNF34Q969K3 372 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 MYEOVQ96EZ4 313 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 ZSCAN32Q9NX65 697 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 COX16Q9P0S2 106 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 HCN2Q9UL51 889 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CLEC4EQ9ULY5 219 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CHD5Q8TDI0 1954 aa11.01□□□□□ -0.65
PFDN5-201ENST00000243040 CCDC163A0A0D9SF12 145 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 ANTXRLA6NF34 631 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 F5H5T6 163 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 NPC1O15118 1278 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 AP5Z1O43299 807 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 TBL1XO60907 577 aa11□□□□□ -0.65
PFDN5-201ENST00000243040 LILRB5O75023 590 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms