RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 GOLGA6DP0CG33 693 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TACR2P21452 398 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TFDP3Q5H9I0 405 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PIGVQ9NUD9 493 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 GOLGA6AQ9NYA3 693 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PLK2Q9NYY3 685 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TBC1D3BA6NDS4 549 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 HEPACAM2A8MVW5 462 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATXN1P54253 815 aaKnown RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 AP1B1Q10567 949 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TEX35Q5T0J7 233 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 SH3PXD2AQ5TCZ1 1133 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZNF662Q6ZS27 426 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 POLNQ7Z5Q5 900 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 UBXN4Q92575 508 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 KXD1Q9BQD3 176 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PLA2G4CQ9UP65 541 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 FGF10O15520 208 aaPredicted RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 RAMP2O60895 175 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 TERF1P54274 439 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 SMAD4Q13485 552 aaKnown RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ADGRF1Q5T601 910 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 KLHDC10Q6PID8 442 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 NT5DC3Q86UY8 548 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 IRF7Q92985 503 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATP2A3Q93084 1043 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PCDHA3Q9Y5H8 950 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 MYH10P35580 1976 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 E2F8A0AVK6 867 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 MTA2O94776 668 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 VIPR2P41587 438 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 COPS2P61201 443 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 GAD2Q05329 585 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 RAD51Q06609 339 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PTP4A2Q12974 167 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 NNTQ13423 1086 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 PDGFRLQ15198 375 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 WHAMMP3Q1A5X7 153 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 LZTR1Q8N653 840 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 CARD9Q9H257 536 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ASIC3Q9UHC3 531 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
TNFAIP3-201ENST00000237289 RING1Q06587 406 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 PRPSAP1Q14558 356 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 PDK1Q15118 436 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 STXBP5Q5T5C0 1151 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 HEATR6Q6AI08 1181 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 SPOCD1Q6ZMY3 1216 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 PSTKQ8IV42 348 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 TEKT4Q8WW24 435 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 HAPLN3Q96S86 360 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 WNT6Q9Y6F9 365 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 SIP14410 1827 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 A0A0U1RQJ8 604 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 XPAP23025 273 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 AMPD1P23109 780 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 KDELR1P24390 212 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 VCPP55072 806 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 GSCP56915 257 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 ADGRE1Q14246 886 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 GRM2Q14416 872 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZNF235Q14590 738 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATP13A4Q4VNC1 1196 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 MSANTD2Q6P1R3 559 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 CFAP52Q8N1V2 620 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 ATRIPQ8WXE1 791 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 OTUB2Q96DC9 234 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 WDR24Q96S15 920 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 ZMYND15Q9H091 742 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 DEC1Q9P2X7 70 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 CDC23Q9UJX2 597 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 SNX12Q9UMY4 172 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 PSMC3P17980 439 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 CXCR3P49682 368 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 HDAC4P56524 1084 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 TAS2R40P59535 323 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 AUHQ13825 339 aaKnown RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 MAATS1Q7Z4T9 603 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 DEPDC1BQ8WUY9 529 aa11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 KLHL8Q9P2G9 620 aaPredicted RBP11.48□□□□□ -0.57
TNFAIP3-201ENST00000237289 SOBPA7XYQ1 873 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 CLDN11O75508 207 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 KRT10P13645 584 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 HLTFQ14527 1009 aaKnown RBP eCLIP11.47□□□□□ -0.579e-6■□□□□ 9.4
TNFAIP3-201ENST00000237289 POLD3Q15054 466 aaPredicted RBP11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
TNFAIP3-201ENST00000237289 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms