RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 KDELC2Q7Z4H8 507 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CDKL3Q8IVW4 592 aaPredicted RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 HIPK4Q8NE63 616 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 NAF1Q96HR8 494 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 AGAP2Q99490 1192 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 MAN1C1Q9NR34 630 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 ARHGEF4Q9NR80 690 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 FETUBQ9UGM5 382 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 KIAA1257Q9ULG3 409 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 MTO1Q9Y2Z2 717 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 HTTP42858 3142 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 NDC80O14777 642 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CAPN9O14815 690 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 MDM4O15151 490 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 ALDOAP04075 364 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SMIM10L2AP0DMW4 78 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SMIM10L2BP0DMW5 78 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 EPHX2P34913 555 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 STX3Q13277 289 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 ZBTB6Q15916 424 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 DPYSL2Q16555 572 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 KIAA0319Q5VV43 1072 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 RBM15BQ8NDT2 890 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 ACVR1CQ8NER5 493 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 APPL2Q8NEU8 664 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SLC7A14Q8TBB6 771 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 LPPQ93052 612 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 KATNBL1Q9H079 304 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 PIGVQ9NUD9 493 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SUFUQ9UMX1 484 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 DNAJC16Q9Y2G8 782 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 WDR90Q96KV7 1748 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 ARRB2P32121 409 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CACNA2D1P54289 1103 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 PDE1CQ14123 709 aaPredicted RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 STILQ15468 1287 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 DGKDQ16760 1214 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 LGSNQ5TDP6 509 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 GPR142Q7Z601 462 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CHSY1Q86X52 802 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 TEX9Q8N6V9 391 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CELF6Q96J87 481 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 XPNPEP3Q9NQH7 507 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 CPSF2Q9P2I0 782 aaKnown RBP9.42□□□□□ -0.9
SYDE2-201ENST00000234668 PCDHA11Q9Y5I1 949 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 RPS6KL1Q9Y6S9 549 aa9.42□□□□□ -0.9
SYDE2-201ENST00000234668 DOCK3Q8IZD9 2030 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 FAM159BA6NKW6 160 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 DPYSL4O14531 572 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TBX10O75333 385 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 GCATO75600 419 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 BAG2O95816 211 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 BPGMP07738 259 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
SYDE2-201ENST00000234668 USP17L7P0C7H9 530 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 BCAT1P54687 386 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 SLC25A3Q00325 362 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 LRRC36Q1X8D7 754 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
SYDE2-201ENST00000234668 NOTUMQ6P988 496 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 SLC26A9Q7LBE3 791 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 GPRIN1Q7Z2K8 1008 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
SYDE2-201ENST00000234668 CRLF3Q8IUI8 442 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 C10orf107Q8IVU9 208 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 ZNF567Q8N184 647 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 PLD6Q8N2A8 252 aaKnown RBP9.41□□□□□ -0.9
SYDE2-201ENST00000234668 SMC1BQ8NDV3 1235 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 RNF139Q8WU17 664 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 ARNTL2Q8WYA1 636 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 RTP4Q96DX8 246 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 MAML3Q96JK9 1138 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 ZNF778Q96MU6 729 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TTC1Q99614 292 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 PAAF1Q9BRP4 392 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 LRRC4Q9HBW1 653 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TMEM216Q9P0N5 145 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 CPA4Q9UI42 421 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 EMCNQ9ULC0 261 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 YJEFN3A6XGL0 299 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 E7ENQ6 273 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 HUS1O60921 280 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 GSRP00390 522 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 CTSHP09668 335 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 YBX3P16989 372 aaKnown RBP eCLIP9.41□□□□□ -0.9
SYDE2-201ENST00000234668 DESP17661 470 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 PEX19P40855 299 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 CCR10P46092 362 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 TUBP50607 506 aa9.41□□□□□ -0.9
SYDE2-201ENST00000234668 LILRA4P59901 499 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms