RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CYB561D2O14569 222 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 AREL1O15033 823 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 TDP2O95551 362 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 NCAM1P13591 858 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 RFX1P22670 979 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 CES1P23141 567 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 LTKP29376 864 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 ARL1P40616 181 aaPredicted RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 SLC26A2P50443 739 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 ALCAMQ13740 583 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 MSS51Q4VC12 460 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 TTC33Q6PID6 262 aaPredicted RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 ZNF786Q8N393 782 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 PDCD6IPQ8WUM4 868 aaKnown RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 RASSF5Q8WWW0 418 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 TFAP2CQ92754 450 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 RMDN3Q96TC7 470 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 AIFM2Q9BRQ8 373 aa13.37□□□□□ -0.27
MSH2-201ENST00000233146 WDR12Q9GZL7 423 aaKnown RBP13.37□□□□□ -0.27
MSH2-201ENST00000233146 AKAP10O43572 662 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 TSPAN9O75954 239 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 MRPS5P82675 430 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 PUM3Q15397 648 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 STILQ15468 1287 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 BMT2Q1RMZ1 405 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 PDPK2PQ6A1A2 396 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 PHTF2Q8N3S3 785 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 PIWIL2Q8TC59 973 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 TUBA1CQ9BQE3 449 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 EMILIN2Q9BXX0 1053 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 AKIP1Q9NQ31 210 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 TXNDC16Q9P2K2 825 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 KRT3P12035 628 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 SLC5A1P13866 664 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 EVX2Q03828 476 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 PTP4A2Q12974 167 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 TUBA3EQ6PEY2 450 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 ASCC1Q8N9N2 400 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 SENP7Q9BQF6 1050 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 GREM2Q9H772 168 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 GLI3P10071 1580 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 H7C0C1 242 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 LIASO43766 372 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 CDH1P12830 882 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 RFC1P35251 1148 aaPredicted RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 COPZ1P61923 177 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 CDC20Q12834 499 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 FNBP1LQ5T0N5 605 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 CIB1Q99828 191 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 SLC13A1Q9BZW2 595 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 IPO11Q9UI26 975 aaKnown RBP13.36□□□□□ -0.27
MSH2-201ENST00000233146 PSME2Q9UL46 239 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 KIAA1024Q9UPX6 916 aa13.36□□□□□ -0.27
MSH2-201ENST00000233146 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 UGT2B4P06133 528 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 BPGMP07738 259 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 MATN1P21941 496 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 ETFBP38117 255 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 GPD2P43304 727 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 IDH3AP50213 366 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 MAVSQ7Z434 540 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SNX29P2Q8IUI4 249 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 LILRB1Q8NHL6 650 aaPredicted RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 NOL6Q9H6R4 1146 aaKnown RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 SNTG2Q9NY99 539 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 NOCTQ9UK39 431 aaKnown RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 DNPEPQ9ULA0 475 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 RNF103O00237 685 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 ASNA1O43681 348 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 DYRK3O43781 588 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 KRT18P05783 430 aaKnown RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
MSH2-201ENST00000233146 TRPC3Q13507 836 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 LDLRAP1Q5SW96 308 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 FBXO36Q8NEA4 188 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 CDRT15Q96T59 188 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SEMA6AQ9H2E6 1030 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 TMEM260Q9NX78 707 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 SERPINB13Q9UIV8 391 aa13.35□□□□□ -0.27
MSH2-201ENST00000233146 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms