RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 OXR1Q8N573 874 aa17.23■□□□□ 0.35
SPCS1-201ENST00000233025 SMARCD1Q96GM5 515 aa17.23■□□□□ 0.35
SPCS1-201ENST00000233025 CBWD1Q9BRT8 395 aa17.23■□□□□ 0.35
SPCS1-201ENST00000233025 PRSS16Q9NQE7 514 aa17.23■□□□□ 0.35
SPCS1-201ENST00000233025 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 A0A1W2PNU3 283 aaPredicted RBP17.22■□□□□ 0.35
SPCS1-201ENST00000233025 FAM47DPA6NHR8 397 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 TIMM44O43615 452 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 LZTS3O60299 673 aaPredicted RBP17.22■□□□□ 0.35
SPCS1-201ENST00000233025 OPA1O60313 960 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 TNNC2P02585 160 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
SPCS1-201ENST00000233025 GALCP54803 685 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 NCEH1Q6PIU2 408 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 XKR5Q6UX68 686 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 USP30Q70CQ3 517 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 SPATS2Q86XZ4 545 aaKnown RBP17.22■□□□□ 0.35
SPCS1-201ENST00000233025 FBXO44Q9H4M3 255 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 KRT82Q9NSB4 513 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 HSPBP1Q9NZL4 362 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 SERGEFQ9UGK8 458 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 LRBAP50851 2863 aa17.22■□□□□ 0.35
SPCS1-201ENST00000233025 SPENQ96T58 3664 aaKnown RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 A8MXQ7 604 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 TLR4O00206 839 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 SLC26A4O43511 780 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 CHKAP35790 457 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 ARID5AQ03989 594 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 TLE1Q04724 770 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 CLN3Q13286 438 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 ZNF211Q13398 564 aaPredicted RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 FNDC3BQ53EP0 1204 aaKnown RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 C4orf17Q53FE4 359 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 ZNF776Q68DI1 518 aaPredicted RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 CYB5D2Q8WUJ1 264 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 RAD54LQ92698 747 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 SMOQ99835 787 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 SLC2A11Q9BYW1 496 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 NMUR1Q9HB89 426 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPCS1-201ENST00000233025 TJP2Q9UDY2 1190 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 NUDT5Q9UKK9 219 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 ZNF510Q9Y2H8 683 aa17.21■□□□□ 0.35
SPCS1-201ENST00000233025 CYP26A1O43174 497 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 AP1G2O75843 785 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 BEST1O76090 585 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 FUKQ8N0W3 1084 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 GOLGA1Q92805 767 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 CCDC97Q96F63 343 aaPredicted RBP17.2■□□□□ 0.34
SPCS1-201ENST00000233025 SLC46A1Q96NT5 459 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 PSMG3-AS1Q96PY0 264 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 SATB2Q9UPW6 733 aa17.2■□□□□ 0.34
SPCS1-201ENST00000233025 A0A1B0GVM2 712 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 ENO4A6NNW6 628 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 CDRT15L2A8MXV6 281 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 H3BQV1 296 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 EFSO43281 561 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 SDC3O75056 442 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 DAB2P98082 770 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 PDE4CQ08493 712 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 C3orf38Q5JPI3 329 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 GPRIN1Q7Z2K8 1008 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 GPD1LQ8N335 351 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
SPCS1-201ENST00000233025 PRR11Q96HE9 360 aaPredicted RBP17.19■□□□□ 0.34
SPCS1-201ENST00000233025 AK8Q96MA6 479 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 ACCSQ96QU6 501 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 RSPH9Q9H1X1 276 aaPredicted RBP17.19■□□□□ 0.34
SPCS1-201ENST00000233025 PCIF1Q9H4Z3 704 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 CSNK1G1Q9HCP0 422 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 SCML2Q9UQR0 700 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 MAN2B2Q9Y2E5 1009 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 PAXBP1Q9Y5B6 917 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 FBN2P35556 2912 aa17.19■□□□□ 0.34
SPCS1-201ENST00000233025 PRPF6O94906 941 aaKnown RBP17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CST3P01034 146 aaPredicted RBP17.18■□□□□ 0.34
SPCS1-201ENST00000233025 RARGP13631 454 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 HLA-FP30511 346 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CORO1AP31146 461 aaKnown RBP17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CCR5P51681 352 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CASP5P51878 434 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 TNNC1P63316 161 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 WDR72Q3MJ13 1102 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 ZSCAN23Q3MJ62 389 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 WDR49Q8IV35 697 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 ZC3H3Q8IXZ2 948 aaKnown RBP17.18■□□□□ 0.34
SPCS1-201ENST00000233025 SLC25A45Q8N413 288 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CPXM2Q8N436 756 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 OR2T34Q8NGX1 318 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 EXTL1Q92935 676 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms