RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 COPG2Q9UBF2 871 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 PRPF19Q9UMS4 504 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 MAFBQ9Y5Q3 323 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 AP4B1Q9Y6B7 739 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 A0A0J9YVX5 310 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 PRPSAP2O60256 369 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 RAP1GAPP47736 663 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 NUMBP49757 651 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 SCNN1BP51168 640 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 KRT81Q14533 505 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 SURF1Q15526 300 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 INSCQ1MX18 579 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 TTLL6Q8N841 843 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 GRIP2Q9C0E4 1043 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 RIMS3Q9UJD0 308 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 GCATO75600 419 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 MICAL2O94851 1124 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 TFAMQ00059 246 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 PACS1Q6VY07 963 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 UNC5BQ8IZJ1 945 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 GCOM2Q9BZD3 368 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 XPNPEP3Q9NQH7 507 aa14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 ZNF277Q9NRM2 450 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 DDX18Q9NVP1 670 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-201ENST00000228916 OGTO15294 1046 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 MAP3K6O95382 1288 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 CAPNS1P04632 268 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 SRGAP2CP0DJJ0 459 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 SRGAP2BP0DMP2 458 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 GRIA1P42261 906 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 OLFML2BQ68BL8 750 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 EPGNQ6UW88 154 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 GAB3Q8WWW8 586 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 RXFP2Q8WXD0 754 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 JDP2Q8WYK2 163 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 CDHR1Q96JP9 859 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 PCDH18Q9HCL0 1135 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 SLC17A6Q9P2U8 582 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 MSCO60682 206 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 PFDN1O60925 122 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 RALBP11234 206 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 CCDC130P13994 396 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 GPD2P43304 727 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 EMP3P54852 163 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 HDAC4P56524 1084 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 METTL21CQ5VZV1 264 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 ZFP1Q6P2D0 407 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 ADCY4Q8NFM4 1077 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 NSUN6Q8TEA1 469 aaKnown RBP14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 DDI1Q8WTU0 396 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 PCDHB12Q9Y5F1 795 aa14.38□□□□□ -0.11
SCNN1A-201ENST00000228916 ARHGAP10A1A4S6 786 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 CCDC160A6NGH7 325 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ADCY6O43306 1168 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 PDGFRAP16234 1089 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 PTPN11Q06124 597 aaPredicted RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ORC1Q13415 861 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 CYLC2Q14093 348 aaPredicted RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SNRNP48Q6IEG0 339 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 CDKL3Q8IVW4 592 aaPredicted RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 LRRN4Q8WUT4 740 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 LRGUKQ96M69 825 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 TWNKQ96RR1 684 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 TCHPQ9BT92 498 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 NIFKQ9BYG3 293 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 QTRT2Q9H974 415 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 COG4Q9H9E3 785 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 TMEM216Q9P0N5 145 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 BTBD7Q9P203 1132 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 PADI4Q9UM07 663 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 GPR25O00155 361 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ATP6V1B1P15313 513 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 YY1P25490 414 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 PCSK6P29122 969 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 CDH8P55286 799 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SULT2A1Q06520 285 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SEMA5AQ13591 1074 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 GK3PQ14409 553 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 BOLA3Q53S33 107 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 MRPL4Q9BYD3 311 aaKnown RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SUDS3Q9H7L9 328 aaPredicted RBP14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 GPATCH2LQ9NWQ4 482 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 VPS28Q9UK41 221 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 GLDCP23378 1020 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 SLC5A2P31639 672 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ISLR2Q6UXK2 745 aa14.37□□□□□ -0.11
SCNN1A-201ENST00000228916 ZNF410Q86VK4 478 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms