RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 EFHC2Q5JST6 749 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 PIK3R6Q5UE93 754 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 MANEALQ5VSG8 457 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 GET4Q7L5D6 327 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF683Q8IZ20 524 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 PYROXD2Q8N2H3 581 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 RIN3Q8TB24 985 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ZSCAN18Q8TBC5 510 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 HSPH1Q92598 858 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 SMARCD2Q92925 531 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 ACSF2Q96CM8 615 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 FAF2Q96CS3 445 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 PBKQ96KB5 322 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 MYADMQ96S97 322 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 KCTD15Q96SI1 283 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 OSBPL9Q96SU4 736 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 SLITRK6Q9H5Y7 841 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 PCDH18Q9HCL0 1135 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 GPATCH2LQ9NWQ4 482 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 OBP2AQ9NY56 170 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 RCOR3Q9P2K3 495 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 AGO1Q9UL18 857 aaKnown RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 SAR1BQ9Y6B6 198 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 KIF26AQ9ULI4 1882 aaPredicted RBP14.54□□□□□ -0.08
SEC61B-201ENST00000223641 DOCK4Q8N1I0 1966 aa14.54□□□□□ -0.08
SEC61B-201ENST00000223641 FAM72CH0Y354 149 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 KCNK3O14649 394 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CD48P09326 243 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 KCNA5P22460 613 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 FCARP24071 287 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CORO1AP31146 461 aaKnown RBP14.53□□□□□ -0.08
SEC61B-201ENST00000223641 HOXC13P31276 330 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 HTR7P34969 479 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 PTPN7P35236 360 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CDKN2BP42772 138 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 HCAR3P49019 387 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CDH6P55285 790 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 DPYSL3Q14195 570 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CLUL1Q15846 466 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 C5orf22Q49AR2 442 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 FAM78AQ5JUQ0 283 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 FAM72AQ5TYM5 149 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 NADSYN1Q6IA69 706 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 FAM72DQ6L9T8 149 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 MFSD7Q6UXD7 560 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 FAM72BQ86X60 149 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 DENND1CQ8IV53 801 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 MAP7D3Q8IWC1 876 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CELF5Q8N6W0 485 aaKnown RBP14.53□□□□□ -0.08
SEC61B-201ENST00000223641 KCTD6Q8NC69 237 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 KIF18AQ8NI77 898 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 SH3RF2Q8TEC5 729 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 HLA-CQ95604 372 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 RBM41Q96IZ5 413 aaKnown RBP14.53□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF670Q9BS34 389 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 SMG9Q9H0W8 520 aaKnown RBP14.53□□□□□ -0.08
SEC61B-201ENST00000223641 CFAP97Q9P2B7 532 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 OR12D3Q9UGF7 316 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 TTC7AQ9ULT0 858 aaPredicted RBP14.53□□□□□ -0.08
SEC61B-201ENST00000223641 NEU3Q9UQ49 428 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 EFR3BQ9Y2G0 817 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 ZNF510Q9Y2H8 683 aa14.53□□□□□ -0.08
SEC61B-201ENST00000223641 IGLV3-10A0A075B6K4 115 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LRRD1A4D1F6 860 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LRIG2O94898 1065 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 MOCS2O96007 188 aaPredicted RBP14.52□□□□□ -0.09
SEC61B-201ENST00000223641 KRT1P04264 644 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 IRF1P10914 325 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LAMP2P13473 410 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 CXCR5P32302 372 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 GJC1P36383 396 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 SLC11A2P49281 568 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 AUHQ13825 339 aaKnown RBP14.52□□□□□ -0.09
SEC61B-201ENST00000223641 PPP2R5EQ16537 467 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LEXMQ3ZCV2 418 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 ADGRF1Q5T601 910 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 SPOCD1Q6ZMY3 1216 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 CPXM2Q8N436 756 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 RNF25Q96BH1 459 aaPredicted RBP14.52□□□□□ -0.09
SEC61B-201ENST00000223641 RSPRY1Q96DX4 576 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LRRC3BQ96PB8 259 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 PSMB7Q99436 277 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 KLHL11Q9NVR0 708 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 CWC15Q9P013 229 aaKnown RBP14.52□□□□□ -0.09
SEC61B-201ENST00000223641 EPS15L1Q9UBC2 864 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 LSM7Q9UK45 103 aaKnown RBP14.52□□□□□ -0.09
SEC61B-201ENST00000223641 SH3BP1Q9Y3L3 701 aa14.52□□□□□ -0.09
SEC61B-201ENST00000223641 hCG_1818297A0A087WSY0 165 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 DRGXA6NNA5 263 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 TACR2P21452 398 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 SLC6A4P31645 630 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 DNA2P51530 1060 aa14.51□□□□□ -0.09
SEC61B-201ENST00000223641 ZNF211Q13398 564 aaPredicted RBP14.51□□□□□ -0.09
SEC61B-201ENST00000223641 SKIV2LQ15477 1246 aaKnown RBP14.51□□□□□ -0.09
SEC61B-201ENST00000223641 TFDP3Q5H9I0 405 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms