RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 KCNU1A8MYU2 1149 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.32e-12■■■■□ 20.9
LSM5-201ENST00000223084 ATG13O75143 517 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 KLF8O95600 359 aaPredicted RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 GYPCP04921 128 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 TACR2P21452 398 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 CCR1P32246 355 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 GGCXP38435 758 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 PRKCIP41743 596 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 FNTBP49356 437 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 RPS24P62847 133 aaKnown RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 MRPS21P82921 87 aaKnown RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 ZBED6P86452 979 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 DMC1Q14565 340 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 ZNF528Q3MIS6 628 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 PREPLQ4J6C6 727 aaPredicted RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 RAB6CQ53S08 254 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 ACAD10Q6JQN1 1059 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 LGI2Q8N0V4 545 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 ATP6V0D2Q8N8Y2 350 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 WFDC5Q8TCV5 224 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 RXFP2Q8WXD0 754 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 NT5C3BQ969T7 300 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 HHIPQ96QV1 700 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
LSM5-201ENST00000223084 RAB6CQ9H0N0 254 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 PIGVQ9NUD9 493 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
LSM5-201ENST00000223084 STAP1Q9ULZ2 295 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 CAPN11Q9UMQ6 739 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 SNX10Q9Y5X0 201 aa13.15□□□□□ -0.3
LSM5-201ENST00000223084 SGK1O00141 431 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 AP5Z1O43299 807 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
LSM5-201ENST00000223084 ADCY5O95622 1261 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 CALB1P05937 261 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 TPM3P06753 285 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
LSM5-201ENST00000223084 ABCB4P21439 1286 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 CASP14P31944 242 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 WASP42768 502 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ATP11AP98196 1134 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 C15orf59Q2T9L4 293 aaPredicted RBP13.14□□□□□ -0.31
LSM5-201ENST00000223084 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 EGFLAMQ63HQ2 1017 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 CHSY1Q86X52 802 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 CFAP52Q8N1V2 620 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ZNF513Q8N8E2 541 aaPredicted RBP13.14□□□□□ -0.31
LSM5-201ENST00000223084 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 NELL1Q92832 810 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ACDQ96AP0 544 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ERLEC1Q96DZ1 483 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ACOX2Q99424 681 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 SELENOOQ9BVL4 669 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ZSCAN32Q9NX65 697 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 RRN3Q9NYV6 651 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 SLC12A6Q9UHW9 1150 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 SLC27A6Q9Y2P4 619 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
LSM5-201ENST00000223084 SDK1Q7Z5N4 2213 aa13.14□□□□□ -0.31
LSM5-201ENST00000223084 ITIH6Q6UXX5 1313 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
LSM5-201ENST00000223084 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
LSM5-201ENST00000223084 ADAM23O75077 832 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 PLEKP08567 350 aaPredicted RBP13.13□□□□□ -0.31
LSM5-201ENST00000223084 SLC2A3P11169 496 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 KRT3P12035 628 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 PDGFRAP16234 1089 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 RRM1P23921 792 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 NBL1P41271 181 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 CXCR3P49682 368 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 GSCP56915 257 aaPredicted RBP13.13□□□□□ -0.31
LSM5-201ENST00000223084 PPP2R5DQ14738 602 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 CDO1Q16878 200 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 CCDC14Q49A88 953 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
LSM5-201ENST00000223084 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
LSM5-201ENST00000223084 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms