RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZNF839A8K0R7 811 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PRR23D1E9PI22 279 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PRR23D2P0DMB1 279 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 AMPD1P23109 780 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 OVGP1Q12889 678 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 ZBTB45Q96K62 511 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PORCNQ9H237 461 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PCDH9Q9HC56 1237 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 TAS2R13Q9NYV9 303 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 POLG2Q9UHN1 485 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 EIF4E1BA6NMX2 242 aaKnown RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 NDUFS2O75306 463 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 HMGCRP04035 888 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 NPY2RP49146 381 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 ALFQ53S48 1182 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 VSIG10LQ86VR7 867 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 TMEM134Q9H6X4 195 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 RAB23Q9ULC3 237 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 GTF2A1LQ9UNN4 478 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 USP20Q9Y2K6 914 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 RIMS1Q86UR5 1692 aaKnown RBP19.4■□□□□ 0.7
SMPD3-201ENST00000219334 DAB1O75553 588 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 CYP3A4P08684 503 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 SMIM10L2AP0DMW4 78 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 SMIM10L2BP0DMW5 78 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 CCDC130P13994 396 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 GRK2P25098 689 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 SERPINB5P36952 375 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 MICU2Q8IYU8 434 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 ULBP1Q9BZM6 244 aa19.4■□□□□ 0.7
SMPD3-201ENST00000219334 TPH1P17752 444 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 CYLC2Q14093 348 aaPredicted RBP19.39■□□□□ 0.7
SMPD3-201ENST00000219334 ZCCHC8Q6NZY4 707 aaKnown RBP19.39■□□□□ 0.7
SMPD3-201ENST00000219334 GPR142Q7Z601 462 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 MIER2Q8N344 545 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 ACTRT1Q8TDG2 376 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 CEP41Q9BYV8 373 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 TKTL2Q9H0I9 626 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 FAM153AQ9UHL3 310 aa19.39■□□□□ 0.7
SMPD3-201ENST00000219334 KANSL1LA0AUZ9 987 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 GSTM1P09488 218 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 NME5P56597 212 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 CCDC142Q17RM4 750 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 MRPL28Q13084 256 aaKnown RBP19.39■□□□□ 0.69
SMPD3-201ENST00000219334 HECTD3Q5T447 861 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 USP45Q70EL2 814 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 ADH1AP07327 375 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 PTPN1P18031 435 aaKnown RBP19.39■□□□□ 0.69
SMPD3-201ENST00000219334 PCBP1Q15365 356 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMPD3-201ENST00000219334 CAMKK1Q8N5S9 505 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 FAM198AQ9UFP1 575 aa19.39■□□□□ 0.69
SMPD3-201ENST00000219334 PRKAR2AP13861 404 aaKnown RBP19.38■□□□□ 0.69
SMPD3-201ENST00000219334 PRLRP16471 622 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 LRRC8DQ7L1W4 858 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 COPS5Q92905 334 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 MAGED4Q96JG8 741 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 MAP10Q9P2G4 905 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 M0R3G1 203 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 TMEM119Q4V9L6 283 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 UNC93AQ86WB7 457 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 RGS18Q9NS28 235 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 SYBUQ9NX95 663 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 SH3BP4Q9P0V3 963 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 NWD1Q149M9 1564 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 MPOP05164 745 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 SLC2A4P14672 509 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 ATAD3BQ5T9A4 648 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 APBB2Q92870 758 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 VAT1Q99536 393 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 PHTF1Q9UMS5 762 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 CAPN6Q9Y6Q1 641 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 HDCP19113 662 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 USP39Q53GS9 565 aaKnown RBP19.38■□□□□ 0.69
SMPD3-201ENST00000219334 EPS8L3Q8TE67 593 aaKnown RBP19.38■□□□□ 0.69
SMPD3-201ENST00000219334 REPS1Q96D71 796 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 PNMA5Q96PV4 448 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 SLC24A2Q9UI40 661 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 USP1O94782 785 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 MMP13P45452 471 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 SPACA7Q96KW9 195 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 PRRG3Q9BZD7 231 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 POLR1EQ9GZS1 481 aaKnown RBP19.38■□□□□ 0.69
SMPD3-201ENST00000219334 FAM50BQ9Y247 325 aa19.38■□□□□ 0.69
SMPD3-201ENST00000219334 RNF103O00237 685 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 WSCD1Q658N2 575 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF544Q6NX49 715 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 ARHGEF19Q8IW93 802 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 CDK20Q8IZL9 346 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 IL17RAQ96F46 866 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 MRPL48Q96GC5 212 aaKnown RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 CORO1BQ9BR76 489 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 ZDHHC6Q9H6R6 413 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DNAJC16Q9Y2G8 782 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DDX28Q9NUL7 540 aaKnown RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 SNX8Q9Y5X2 465 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DUSP10Q9Y6W6 482 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 A0A088AWK7 358 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms