RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 TCEA3O75764 348 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 VHLP40337 213 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 LHX1P48742 406 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 TDRPQ86YL5 185 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 WDTC1Q8N5D0 677 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 SAR1AQ9NR31 198 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 SMIM28A0A1B0GU29 152 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 ODC1P11926 461 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 OR1G1P47890 313 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 SLC1A6P48664 564 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 IL31Q6EBC2 164 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 PYROXD2Q8N2H3 581 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 CLEC4CQ8WTT0 213 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 INPP5DQ92835 1189 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 ATP6V1E2Q96A05 226 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 ILKAPQ9H0C8 392 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 CHST12Q9NRB3 414 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 IL1RAPL1Q9NZN1 696 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 TPP1O14773 563 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 FBXO21O94952 628 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 TCN1P20061 433 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 ETFBP38117 255 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 MATKP42679 507 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 GHRHRQ02643 423 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 SLC25A11Q02978 314 aaKnown RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 PDCD2Q16342 344 aaPredicted RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 MIB1Q86YT6 1006 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 TMA16Q96EY4 203 aaKnown RBP12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 RNPEPL1Q9HAU8 725 aa12.69□□□□□ -0.38
TM9SF4-201ENST00000217315 A0A096LPK6 155 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 PFDN6O15212 129 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TIMM44O43615 452 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 STBD1O95210 358 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 LTFP02788 710 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 ERCC2P18074 760 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 PGAM1P18669 254 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 BDNFP23560 247 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 SERPINB8P50452 374 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 KPNB1Q14974 876 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TRIP10Q15642 601 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 CLNKQ7Z7G1 428 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TKTL2Q9H0I9 626 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 CATSPERBQ9H7T0 1116 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TAGLN3Q9UI15 199 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 CHKBQ9Y259 395 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 MEI4A8MW99 385 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 AP3B1O00203 1094 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 PPEF2O14830 753 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 EDN1P05305 212 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 GRK2P25098 689 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 LMO2P25791 158 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 SERPINB5P36952 375 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 ZNF235Q14590 738 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 LENG1Q96BZ8 264 aaPredicted RBP12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TSC22D3Q99576 134 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 MAF1Q9H063 256 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 ADAM7Q9H2U9 754 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 DARSP14868 501 aaKnown RBP12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 TSHRP16473 764 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 AXLP30530 894 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 GPX6P59796 221 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 SPRED3Q2MJR0 410 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 PARP6Q2NL67 630 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 SHCBP1Q8NEM2 672 aa12.68□□□□□ -0.38
TM9SF4-201ENST00000217315 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 BTBD19C9JJ37 291 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 LGR5O75473 907 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 TADA2AO75478 443 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 CSPG5O95196 566 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 SERPINE1P05121 402 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 MMP3P08254 477 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 ZNF132P52740 706 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 HABP4Q5JVS0 413 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 SNX30Q5VWJ9 437 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 TRMT10BQ6PF06 316 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
TM9SF4-201ENST00000217315 TMPRSS6Q8IU80 811 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms