RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TPP1O14773 563 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 VTNP04004 478 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 LGALS2P05162 132 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 DSG1Q02413 1049 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 BST2Q10589 180 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 LAMC2Q13753 1193 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 HIC1Q14526 733 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 CASC4Q6P4E1 433 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 RFX8Q6ZV50 586 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 PSTKQ8IV42 348 aaKnown RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 PPP4R1Q8TF05 950 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 NLRP7Q8WX94 980 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 CLPTM1LQ96KA5 538 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 TSC22D3Q99576 134 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 LBHD1Q9BQE6 289 aaPredicted RBP13.7□□□□□ -0.22
SRP54-201ENST00000216774 FERMT1Q9BQL6 677 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 APOL6Q9BWW8 343 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 DNAJC28Q9NX36 388 aa13.7□□□□□ -0.22
SRP54-201ENST00000216774 A0A088AWK7 358 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 SMIM24O75264 130 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 CAPN15O75808 1086 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 VAV1P15498 845 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
SRP54-201ENST00000216774 ADORA2AP29274 412 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 CRABP2P29373 138 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ARL4AP40617 200 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 BCAT1P54687 386 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 PCLAFQ15004 111 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ANKRD52Q8NB46 1076 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 CLMNQ96JQ2 1002 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 TRAPPC9Q96Q05 1148 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ASB14A6NK59 587 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ITM2AO43736 263 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 UPP2O95045 317 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
SRP54-201ENST00000216774 CHRM1P11229 460 aaPredicted RBP13.69□□□□□ -0.22
SRP54-201ENST00000216774 ACADSBP45954 432 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 COPAP53621 1224 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ATXN1P54253 815 aaKnown RBP13.69□□□□□ -0.22
SRP54-201ENST00000216774 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
SRP54-201ENST00000216774 IRX4P78413 519 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 UNC5BQ8IZJ1 945 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 ARNTL2Q8WYA1 636 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 PDP2Q9P2J9 529 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 RBPJLQ9UBG7 517 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 NME7Q9Y5B8 376 aa13.69□□□□□ -0.22
SRP54-201ENST00000216774 KAT6AQ92794 2004 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 SF3B1O75533 1304 aaKnown RBP eCLIP13.68□□□□□ -0.228e-10■■■■■ 32.7
SRP54-201ENST00000216774 CCNT2O60583 730 aaKnown RBP13.68□□□□□ -0.22
SRP54-201ENST00000216774 SIN3BO75182 1162 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
SRP54-201ENST00000216774 PROCP04070 461 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 GOT1P17174 413 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 CACNA2D1P54289 1103 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 PDE1BQ01064 536 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 EFHC1Q5JVL4 640 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 C16orf46Q6P387 395 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 MTHFD1LQ6UB35 978 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 IZUMO2Q6UXV1 221 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 CLEC4CQ8WTT0 213 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 CCDC28BQ9BUN5 200 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 MROH8Q9H579 483 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■□□□□ 8.7
SRP54-201ENST00000216774 CITO14578 2027 aa13.68□□□□□ -0.22
SRP54-201ENST00000216774 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 RNF103O00237 685 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CXCL11O14625 94 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 ZNF189O75820 626 aaPredicted RBP13.67□□□□□ -0.22
SRP54-201ENST00000216774 KCNA4P22459 653 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 MGAT1P26572 445 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 GLUD2P49448 558 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 HARS2P49590 506 aaKnown RBP13.67□□□□□ -0.22
SRP54-201ENST00000216774 ZBTB6Q15916 424 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CCDC33Q8N5R6 958 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 OR6B3Q8NGW1 331 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 HSFY1Q96LI6 401 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 SORT1Q99523 831 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 LGMNQ99538 433 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 FZD10Q9ULW2 581 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 PRKCGP05129 697 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 POLBP06746 335 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 MX2P20592 715 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
SRP54-201ENST00000216774 IDH3AP50213 366 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 CDK7P50613 346 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 SESN2P58004 480 aaPredicted RBP13.67□□□□□ -0.22
SRP54-201ENST00000216774 CRADDP78560 199 aa13.67□□□□□ -0.22
SRP54-201ENST00000216774 BTKQ06187 659 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms