RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 CD6P30203 668 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 TPMTP51580 245 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 PITX1P78337 314 aaPredicted RBP23.03■■□□□ 1.28
VTI1B-201ENST00000216456 LMAN2Q12907 356 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 DUOXA1Q1HG43 343 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 PIK3R6Q5UE93 754 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 SYPL2Q5VXT5 272 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 SERPINA13PQ6UXR4 307 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 FAM124AQ86V42 546 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 IRF2BP1Q8IU81 584 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 RGL4Q8IZJ4 473 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 FCRL2Q96LA5 508 aaPredicted RBP23.03■■□□□ 1.28
VTI1B-201ENST00000216456 HSFY1Q96LI6 401 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 ITM2CQ9NQX7 267 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 WSB2Q9NYS7 404 aaPredicted RBP23.03■■□□□ 1.28
VTI1B-201ENST00000216456 KIAA1468Q9P260 1216 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 GGA2Q9UJY4 613 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 ANGPTL2Q9UKU9 493 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 SLC6A14Q9UN76 642 aa23.03■■□□□ 1.28
VTI1B-201ENST00000216456 PCDH15Q96QU1 1955 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 BECN2A8MW95 431 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 ACSL4O60488 711 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 GNA14O95837 355 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 SERPINF2P08697 491 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 NUMBP49757 651 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 FOXC1Q12948 553 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 PTPRNQ16849 979 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 FAM149B1Q96BN6 582 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 SIPA1Q96FS4 1042 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 SLCO1B1Q9Y6L6 691 aa23.02■■□□□ 1.28
VTI1B-201ENST00000216456 MUC22E2RYF6 1773 aaPredicted RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 PAPSS1O43252 624 aaPredicted RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 MOCS2O96007 188 aaPredicted RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 PABPC1P11940 636 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 RPL34P49207 117 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 RPS24P62847 133 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 EIF4HQ15056 248 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 STILQ15468 1287 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 TAF5Q15542 800 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 ARHGAP44Q17R89 818 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 FNDC3BQ53EP0 1204 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 MBLAC2Q68D91 279 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 MMS22LQ6ZRQ5 1243 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 KIAA0907Q7Z7F0 614 aaPredicted RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 TAC4Q86UU9 113 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 CFAP52Q8N1V2 620 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 ZNF606Q8WXB4 792 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 NUCKS1Q9H1E3 243 aaKnown RBP23.01■■□□□ 1.27
VTI1B-201ENST00000216456 TMEM245Q9H330 911 aa23.01■■□□□ 1.27
VTI1B-201ENST00000216456 KMT2BQ9UMN6 2715 aaPredicted RBP23■■□□□ 1.27
VTI1B-201ENST00000216456 E5RJQ4 531 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 THAP12O43422 761 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 FBXO21O94952 628 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 LATS1O95835 1130 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 USP8P40818 1118 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 FAM193AP78312 1265 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 ARID5AQ03989 594 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 GFPT1Q06210 699 aaPredicted RBP23■■□□□ 1.27
VTI1B-201ENST00000216456 TRIM65Q6PJ69 517 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 MINDY1Q8N5J2 469 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 PRCCQ92733 491 aaPredicted RBP23■■□□□ 1.27
VTI1B-201ENST00000216456 LMLNQ96KR4 655 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 SLC4A5Q9BY07 1137 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 RWDD2AQ9UIY3 292 aa23■■□□□ 1.27
VTI1B-201ENST00000216456 CKAP5Q14008 2032 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 CACNA1BQ00975 2339 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 CACNA1EQ15878 2313 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 SPAARA0A1B0GVQ0 90 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 FAM170AA1A519 330 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 PNMA6AP0CW24 399 aaPredicted RBP22.99■■□□□ 1.27
VTI1B-201ENST00000216456 CSRP1P21291 193 aaKnown RBP22.99■■□□□ 1.27
VTI1B-201ENST00000216456 HOXD12P35452 270 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 UBE2HP62256 183 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 PLEKHG6Q3KR16 790 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 FSCBQ5H9T9 825 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 METTL3Q86U44 580 aaKnown RBP22.99■■□□□ 1.27
VTI1B-201ENST00000216456 PASD1Q8IV76 773 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.99■■□□□ 1.27
VTI1B-201ENST00000216456 GOLGA1Q92805 767 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 SLC39A13Q96H72 371 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 MIR1-1HGQ9H1L0 117 aa22.99■■□□□ 1.27
VTI1B-201ENST00000216456 INTS6Q9UL03 887 aaKnown RBP22.99■■□□□ 1.27
VTI1B-201ENST00000216456 CEP295Q9C0D2 2601 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 MEI4A8MW99 385 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 ARHGAP33O14559 1287 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 NPC1O15118 1278 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 GNA15P30679 374 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 SLC11A2P49281 568 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 ATXN3P54252 364 aaPredicted RBP22.98■■□□□ 1.27
VTI1B-201ENST00000216456 SHC2P98077 582 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 SEMA3BQ13214 749 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 CAMK2GQ13555 558 aaPredicted RBP22.98■■□□□ 1.27
VTI1B-201ENST00000216456 HSP90AA4PQ58FG1 418 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 NUGGCQ68CJ6 796 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 PIP4P1Q86T03 277 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 UNC45BQ8IWX7 931 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 ZCCHC9Q8N567 271 aaKnown RBP22.98■■□□□ 1.27
VTI1B-201ENST00000216456 WDTC1Q8N5D0 677 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 OR2T3Q8NH03 318 aa22.98■■□□□ 1.27
VTI1B-201ENST00000216456 CEP76Q8TAP6 659 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms