RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 APOC4-APOC2K7ER74 178 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 IFRD1O00458 451 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 APOC2P02655 101 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 HPGDP15428 266 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CYP2A7P20853 494 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 GUCA1AP43080 201 aaPredicted RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FAM45BPQ6NSW5 357 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ARHGEF19Q8IW93 802 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 LPCAT1Q8NF37 534 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 CELF6Q96J87 481 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ZCCHC2Q9C0B9 1178 aaKnown RBP13.88□□□□□ -0.19
SF3A1-201ENST00000215793 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 TECPR2O15040 1411 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
SF3A1-201ENST00000215793 RFX3P48380 749 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 SLC44A4Q53GD3 710 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 USP39Q53GS9 565 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF614Q8N883 585 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 HASPINQ8TF76 798 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 EDEM1Q92611 657 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ELOVL4Q9GZR5 314 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ZSCAN32Q9NX65 697 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 DLGAP3O95886 979 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 GSTM1P09488 218 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 SLC2A4P14672 509 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 PSMD7P51665 324 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 MEA1Q16626 185 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 WDR48Q8TAF3 677 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ABHD16BQ9H3Z7 469 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 SYNPO2Q9UMS6 1093 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 RBAK-RBAKDNI3L0D1 243 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 FCHO1O14526 889 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 SOX10P56693 466 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 SLC6A3Q01959 620 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF544Q6NX49 715 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 PHF21BQ96EK2 531 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 FAM163AQ96GL9 167 aaPredicted RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 NINJ2Q9NZG7 142 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 NDUFAF1Q9Y375 327 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 PDE5AO76074 875 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 OR1E1P30953 314 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 TUBP50607 506 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 TBX2Q13207 712 aaPredicted RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 CBWD3Q5JTY5 395 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 CBWD5Q5RIA9 395 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 MIER2Q8N344 545 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 TMEM159Q96B96 161 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 MTG1Q9BT17 334 aaPredicted RBP13.87□□□□□ -0.19
SF3A1-201ENST00000215793 ENOPH1Q9UHY7 261 aa13.87□□□□□ -0.19
SF3A1-201ENST00000215793 C15orf38-AP3S2A0A0A6YYH1 394 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 MICAL2O94851 1124 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 PCNAP12004 261 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 C4BPBP20851 252 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 SSTR1P30872 391 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 PURAQ00577 322 aaKnown RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF844Q08AG5 666 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ARPINQ7Z6K5 226 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 BTBD10Q9BSF8 475 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 IDI2Q9BXS1 227 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 RPS6KB2Q9UBS0 482 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 LRRC10BA6NIK2 292 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 VPS4BO75351 444 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 EPHX2P34913 555 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 CSDE1O75534 798 aaKnown RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 OXNAD1Q96HP4 312 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 BLOC1S4Q9NUP1 217 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 WDR27A2RRH5 827 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 CCNT2O60583 730 aaKnown RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 AMPD1P23109 780 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 MGAT1P26572 445 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 PBLDP30039 288 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ZFP1Q6P2D0 407 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 FGD2Q7Z6J4 655 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 KATNAL2Q8IYT4 538 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms