RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 VTA1Q9NP79 307 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CETPP11597 493 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 OR1E1P30953 314 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CHKAP35790 457 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 GATAD2AQ86YP4 633 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 COPS5Q92905 334 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF446Q9NWS9 450 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 LIMD1Q9UGP4 676 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SOX13Q9UN79 622 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 EPHB6O15197 1021 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC25A27O95847 323 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 CAPN1P07384 714 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 GHRP10912 638 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ACADSP16219 412 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 PTPN4P29074 926 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 MARCKSL1P49006 195 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 DEFA1P59665 94 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 DEFA3P59666 94 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 MADCAM1Q13477 382 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF75CPQ92670 426 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 OMDQ99983 421 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 GRIP2Q9C0E4 1043 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ZFYVE1Q9HBF4 777 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 PIPSLA2A3N6 862 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 E5RJQ4 531 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC12A3P55017 1021 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 AKIRIN2Q53H80 203 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SPATA20Q8TB22 786 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 SIKE1Q9BRV8 207 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ACTR8Q9H981 624 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 TCF7L2Q9NQB0 619 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 ACOT9Q9Y305 439 aa13.93□□□□□ -0.18
TGFBR3-201ENST00000212355 PQBP1O60828 265 aaKnown RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 DGCR6Q14129 220 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 PDK2Q15119 407 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 ABRAQ8N0Z2 381 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 BHLHE22Q8NFJ8 381 aaPredicted RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 FAM120BQ96EK7 910 aaKnown RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 UBE2OQ9C0C9 1292 aaKnown RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 DSEQ9UL01 958 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 USP31Q70CQ4 1352 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF839A8K0R7 811 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 AVILO75366 819 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 C16orf72Q14CZ0 275 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SDE2Q6IQ49 451 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 NUDT18Q6ZVK8 323 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 UBASH3BQ8TF42 649 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 RHBGQ9H310 441 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 RGS18Q9NS28 235 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 TBKBP1A7MCY6 615 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SEC22BO75396 215 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 MYBL2P10244 700 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF37AP17032 561 aaPredicted RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 RRM2P31350 389 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CYP4F2P78329 520 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC25A3Q00325 362 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CYP4F3Q08477 520 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SDHAF4Q5VUM1 108 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 WDR49Q8IV35 697 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 OR6Y1Q8NGX8 325 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 YME1L1Q96TA2 773 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CNPY3Q9BT09 278 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 TLR10Q9BXR5 811 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 PAIP1Q9H074 479 aaKnown RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 ARMC7Q9H6L4 198 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 PIRTP0C851 137 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SHMT1P34896 483 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 GRIK4Q16099 956 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 FGD3Q5JSP0 725 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CLVS1Q8IUQ0 354 aaPredicted RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 RSPH1Q8WYR4 309 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 NOL6Q9H6R4 1146 aaKnown RBP13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF112Q9UJU3 913 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CCDC154A6NI56 674 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CCNG2Q16589 344 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SLC39A12Q504Y0 691 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 BTBD10Q9BSF8 475 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 MROH8Q9H579 483 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 SNCAIPQ9Y6H5 919 aa13.92□□□□□ -0.18
TGFBR3-201ENST00000212355 CKBP12277 381 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 DEFB106AQ8N104 65 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 MECRQ9BV79 373 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 ELOVL6Q9H5J4 265 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 CDHR5Q9HBB8 845 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 BTN3A1O00481 513 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 TIMM44O43615 452 aa13.91□□□□□ -0.18
TGFBR3-201ENST00000212355 ZNF862O60290 1169 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms