RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ATG4CQ96DT6 458 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 SIGLEC10Q96LC7 697 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 CATSPER2Q96P56 530 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 SDCBP2Q9H190 292 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 FAM58BPP0C7Q3 252 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 CDKL1Q00532 357 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 XKR3Q5GH77 459 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 TMEM198Q66K66 360 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 EME1Q96AY2 570 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 SORCS3Q9UPU3 1222 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 RPS6KL1Q9Y6S9 549 aa20.65■□□□□ 0.9
PPP1R3F-201ENST00000055335 TNFAIP8O95379 198 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 TCF7P36402 384 aaPredicted RBP20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 ZNF667Q5HYK9 610 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 LRRC71Q8N4P6 559 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 GRIN3AQ8TCU5 1115 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 CDKL2Q92772 493 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 SORT1Q99523 831 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 TBC1D30Q9Y2I9 924 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 ARHGAP10A1A4S6 786 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 ZSCAN9O15535 394 aaPredicted RBP20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 GLRA3O75311 464 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 MICAL2O94851 1124 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 CPA3P15088 417 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 GPD1P21695 349 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 OLIG2Q13516 323 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 FSCBQ5H9T9 825 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 EEPD1Q7L9B9 569 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 PQLC3Q8N755 202 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 DCUN1D5Q9BTE7 237 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 CAB39LQ9H9S4 337 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 ARHGEF38Q9NXL2 777 aa20.64■□□□□ 0.89
PPP1R3F-201ENST00000055335 MED7O43513 233 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 STRNO43815 780 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 TRMUO75648 421 aaKnown RBP20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 STBD1O95210 358 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 TNNC2P02585 160 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ASNSP08243 561 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 MGAT1P26572 445 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 SLC5A2P31639 672 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 PRAMEP78395 509 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 DLG2Q15700 870 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 PCDH19Q8TAB3 1148 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 RCN3Q96D15 328 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 AGAP3Q96P47 875 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ADA2Q9NZK5 511 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 FZD1Q9UP38 647 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 SYNJ2BP-COX16A0A087WUM0 186 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 SERPINB9P50453 376 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ATXN1P54253 815 aaKnown RBP20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 MTTPP55157 894 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ART3Q13508 389 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 BRSK2Q8IWQ3 736 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 BTBD9Q96Q07 612 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 PKP2Q99959 881 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 NUF2Q9BZD4 464 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 PNPLA8Q9NP80 782 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ZNF302Q9NR11 478 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 FAM49BQ9NUQ9 324 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 COX16Q9P0S2 106 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 GSRP00390 522 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 ASPAP45381 313 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 DCTN2Q13561 401 aaKnown RBP20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 VSIG10LQ86VR7 867 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 TCF7L2Q9NQB0 619 aa20.63■□□□□ 0.89
PPP1R3F-201ENST00000055335 INO80B-WBP1J3KQ70 363 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 ATP9BO43861 1147 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 USP12O75317 370 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 GJB1P08034 283 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 RPL10P27635 214 aaKnown RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 FAM47CQ5HY64 1035 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 PACS1Q6VY07 963 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 RNF149Q8NC42 400 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 FAM151AQ8WW52 585 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 INO80BQ9C086 356 aaPredicted RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 COPG2Q9UBF2 871 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 USP21Q9UK80 565 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 FAM159BA6NKW6 160 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 GOLGA8TH3BQL2 631 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 KCNA2P16389 499 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 MS4A2Q01362 244 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 CAPSQ13938 189 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 OGFRL1Q5TC84 451 aaPredicted RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 SNRNP48Q6IEG0 339 aaKnown RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 PORCNQ9H237 461 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 PDLIM7Q9NR12 457 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 STRCQ7RTU9 1775 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 SERPINB8P50452 374 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 TRNP1Q6NT89 227 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 KCNT2Q6UVM3 1135 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 WDR49Q8IV35 697 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 DSELQ8IZU8 1212 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 ZNF512Q96ME7 567 aaPredicted RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 SERPINI1Q99574 410 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 SLC38A10Q9HBR0 1119 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 C20orf96Q9NUD7 363 aaPredicted RBP20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 MFHAS1Q9Y4C4 1052 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 PCDHA11Q9Y5I1 949 aa20.62■□□□□ 0.89
PPP1R3F-201ENST00000055335 RGS20O76081 388 aa20.61■□□□□ 0.89
PPP1R3F-201ENST00000055335 CHRNGP07510 517 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms