RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CSH2P0DML3 217 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 WASHC2DQ5SRD0 308 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SLC26A9Q7LBE3 791 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 UNC93AQ86WB7 457 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SLC25A41Q8N5S1 370 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 B3GALNT2Q8NCR0 500 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SMG8Q8ND04 991 aaKnown RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 STMN2Q93045 179 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 DDX50Q9BQ39 737 aaKnown RBP13.55□□□□□ -0.24
CTNS-201ENST00000046640 NMUR2Q9GZQ4 415 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 KCNK13Q9HB14 408 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 TAS2R1Q9NYW7 299 aa13.55□□□□□ -0.24
CTNS-201ENST00000046640 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 I3L4J1 428 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 M0QYT0 321 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 VAV1P15498 845 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 CCNG1P51959 295 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 SARNPP82979 210 aaKnown RBP13.54□□□□□ -0.24
CTNS-201ENST00000046640 KIAA0319Q5VV43 1072 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.54□□□□□ -0.24
CTNS-201ENST00000046640 RHOBTB2Q9BYZ6 727 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
CTNS-201ENST00000046640 BCLAF3A2AJT9 711 aaKnown RBP13.54□□□□□ -0.24
CTNS-201ENST00000046640 A6NHS1 94 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 FCHO1O14526 889 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 MFSD11O43934 449 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 TBX10O75333 385 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 CD4P01730 458 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 HOXD8P13378 290 aaPredicted RBP13.54□□□□□ -0.24
CTNS-201ENST00000046640 GMPRP36959 345 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 ZCCHC23Q6ZST2 131 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 ZNF534Q76KX8 674 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 CRYBG2Q8N1P7 616 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 AGAP3Q96P47 875 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 LRRC4Q9HBW1 653 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 DERAQ9Y315 318 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 B2RBV5 119 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 KCNK1O00180 336 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 COPEO14579 308 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 BAG2O95816 211 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 PGM1P36871 562 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 ARL4AP40617 200 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 MLH1P40692 756 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 KLC1Q07866 573 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 SRPK1Q96SB4 655 aaKnown RBP13.54□□□□□ -0.24
CTNS-201ENST00000046640 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 STOML1Q9UBI4 398 aa13.54□□□□□ -0.24
CTNS-201ENST00000046640 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 MYADML2A6NDP7 307 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 PTGESO14684 152 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 USP12O75317 370 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 AMHP03971 560 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 C6orf222P0C671 652 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 ZNF865P0CJ78 1059 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 PTPN9P43378 593 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 SNX16P57768 344 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 INHBEP58166 350 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 TMPRSS15P98073 1019 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 CDK16Q00536 496 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 RASA2Q15283 850 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 CDKL3Q8IVW4 592 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 ARID3BQ8IVW6 561 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 PTCD3Q96EY7 689 aaKnown RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 GAD1Q99259 594 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 PAAF1Q9BRP4 392 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 FAM72CH0Y354 149 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 NRP1O14786 923 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 VHLP40337 213 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 MATKP42679 507 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 FAM72AQ5TYM5 149 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 FAM72DQ6L9T8 149 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 PAQR9Q6ZVX9 377 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 FAM72BQ86X60 149 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 EGFL6Q8IUX8 553 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 SIX6OS1Q8N1H7 587 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 SLC7A14Q8TBB6 771 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 HASPINQ8TF76 798 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 HTR3CQ8WXA8 447 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 EDEM1Q92611 657 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 RILPQ96NA2 401 aa13.53□□□□□ -0.24
CTNS-201ENST00000046640 C11orf84Q9BUA3 381 aaPredicted RBP13.53□□□□□ -0.24
CTNS-201ENST00000046640 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms