RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Daam1Q8BPM0 1077 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Foxp3Q99JB6 429 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Subh2bvQ9D9Z7 123 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 PrccQ9EQC8 491 aaKnown RBP13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Crlf3Q9Z2L7 442 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Adamts9E9PUN6 1931 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 A930018M24RikB7ZMY3 218 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Speer4f2E9Q366 295 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 E2f6O54917 272 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 BtkP35991 659 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 FynP39688 537 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 CtswP56203 371 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Pdcd1Q02242 288 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Capn3Q64691 821 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tbc1d12Q6A039 696 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Wdr11Q8K1X1 1223 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 DolkQ8R2Y3 534 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tbc1d19Q8VDV7 526 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Polr3cQ9D483 533 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 GraspQ9JJA9 392 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Msl3Q9WVG9 525 aa13.83□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ces1bD3Z5G7 567 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Xbp1O35426 267 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 P01644 108 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 P01645 108 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 P01646 108 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 P01647 108 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Hoxb8P09632 243 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Hoxd10P28359 340 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slc17a7Q3TXX4 560 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Nt5dc3Q3UHB1 546 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Mylk3Q3UIZ8 795 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Syce2Q505B8 171 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm14685Q52KH6 695 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Olfr8Q60892 310 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ddx1Q91VR5 740 aaKnown RBP13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Rxfp2Q91ZZ5 737 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 St13Q99L47 371 aaKnown RBP13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ubxn11Q9D572 484 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 B020011L13RikA0A087WQI7 412 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm5485A0A1D5RM98 91 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tcp11x2A2AEI7 503 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Vmn2r100E9QAZ9 850 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Vmn2r39L7N2E5 861 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Akap1O08715 857 aaKnown RBP13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ppargc1aO70343 797 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Soat2O88908 525 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Fam167bP17257 162 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Acvr2bP27040 536 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Klf1P46099 358 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Kpnb1P70168 876 aaKnown RBP13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 PkdccQ5RJI4 492 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Kiaa1841Q68FF0 718 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 OcrlQ6NVF0 900 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Abraxas1Q8BPZ8 407 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Clec1aQ8BWY2 269 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Slfn5Q8CBA2 884 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Pnpt1Q8K1R3 783 aaKnown RBP13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Pcdhb6Q91XZ4 772 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Sntg2Q925E0 539 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Dnajb4Q9D832 337 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Kat2aQ9JHD2 830 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Homer2Q9QWW1 354 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Col5a3Q9JLI2 1739 aa13.82□□□□□ -0.2
Rnf4-204ENSMUST00000182047 MipepA6H611 711 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm6205E9PZS2 359 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 TpteG5E8H5 664 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm3336J3QMQ6 198 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Cldn5O54942 218 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Mc4rP56450 332 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 FerP70451 823 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 SiaeP70665 541 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gsdmc2Q2KHK6 480 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gsdmc4Q3TR54 480 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 B3gnt3Q5JCS9 372 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Grik1Q60934 836 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Parp6Q6P6P7 630 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Olfr1415Q7TQS4 311 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Eif2aQ8BJW6 581 aaKnown RBP13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Phactr3Q8BYK5 558 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm6367Q8C6L9 287 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gsdmc3Q8CB12 480 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Tbc1d22aQ8R5A6 516 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Olfr1416Q8VGU4 312 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Trim60Q8VI40 466 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Cttnbp2nlQ99LJ0 638 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Nme5Q99MH5 211 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Nudt8Q9CR24 210 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Rex1bdQ9CYZ6 169 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Mrps9Q9D7N3 390 aaKnown RBP13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Foxe3Q9QY14 288 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Plod1Q9R0E2 728 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ror2Q9Z138 944 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Mbd1Q9Z2E2 636 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Gm45861A0A1B0GRY3 1923 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Ighv11-2A0A075B5R8 117 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Grik3B1AS29 919 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Siah3B2RWG3 268 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Olfr743L7N1Y2 311 aa13.81□□□□□ -0.2
Rnf4-204ENSMUST00000182047 Srpk1O70551 648 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms