RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Zc3h3Q8CHP0 950 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ces2aQ8QZR3 558 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Prpsap2Q8R574 369 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Fbxw7Q8VBV4 629 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ppa2Q91VM9 330 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Themis2Q91YX0 663 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Cep19Q9CQA8 163 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Ola1Q9CZ30 396 aaKnown RBP12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 TarsQ9D0R2 722 aaKnown RBP12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 ArskQ9D2L1 553 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Htra2Q9JIY5 458 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 M1apQ9Z0E1 529 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Stau1Q9Z108 487 aaKnown RBP12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Pld1Q9Z280 1074 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 Stk25Q9Z2W1 426 aa12.84□□□□□ -0.35
Trim50-202ENSMUST00000111180 C7D3YXF5 845 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Speer2E9Q9U2 264 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Xbp1O35426 267 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Fgf15O35622 218 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Krt19P19001 403 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 H2afxP27661 143 aaKnown RBP12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 SykP48025 629 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Arl4aP61213 200 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Msx3P70354 204 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Faf2Q3TDN2 445 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Brms1lQ3U1T3 323 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 B020004J07RikQ3UTC0 476 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Paqr9Q6TCG2 375 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Defb34Q7TNV8 81 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Trnau1apQ80VC6 287 aaKnown RBP12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Hpcal4Q8BGZ1 191 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 RbakQ8BQC8 711 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Pdcl3Q8BVF2 240 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 DrgxQ8BYH0 263 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Q8C4P0 716 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Wdr27Q8C5V5 780 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Cstf2tQ8C7E9 632 aaKnown RBP12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Trim60Q8VI40 466 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Znf622Q91VY9 476 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Pcdha10Q91Y20 946 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Nek8Q91ZR4 698 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Prc1Q99K43 603 aaKnown RBP12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Gps1Q99LD4 471 aaKnown RBP12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Kif12Q9D2Z8 642 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Smg9Q9DB90 520 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Hsd3b7Q9EQC1 369 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ggt5Q9Z2A9 573 aa12.83□□□□□ -0.36
Trim50-202ENSMUST00000111180 MgamB5THE2 1827 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Arhgef37A1IGU4 676 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Atp8b4A2ANX3 1194 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Kcng1A2BDX4 514 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Trim30cD3YVI9 513 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 4930444G20RikD3Z741 495 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 4930558K02RikE0CXC6 182 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 C6E9Q6D8 931 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Spata31E9QAF0 1014 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Gm3460E9QAI8 215 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Gfra2O08842 464 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Mllt10O54826 1068 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Atxn1lP0C7T6 687 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Zfp42P22227 288 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ccnb1P24860 430 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Usp46P62069 366 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Vsnl1P62761 191 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 9130409I23RikQ3TS87 320 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ugt3a1Q3UP75 523 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 TceancQ3US16 359 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Rcsd1Q3UZA1 412 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ubn1Q4G0F8 1135 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 G2e3Q5RJY2 716 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Cntn2Q61330 1040 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Sec23ipQ6NZC7 998 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Slc39a10Q6P5F6 833 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Prmt8Q6PAK3 394 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Olfr867Q7TRF3 331 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 CgasQ8C6L5 507 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ccdc17Q8CE13 565 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ifi205aQ8CGE8 404 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Ugt3a2Q8JZZ0 523 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Arhgap18Q8K0Q5 663 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Rtn4rl1Q8K0S5 445 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Acsf2Q8VCW8 615 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Fbxo21Q8VDH1 627 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Tm4sf5Q91XF2 196 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Lysmd3Q99LE3 305 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Cyp4f13Q99N19 523 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Cuedc2Q9CXX9 284 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Cpxm2Q9D2L5 764 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Rin2Q9D684 903 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Rexo2Q9D8S4 237 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Sgf29Q9DA08 293 aaKnown RBP12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Slc25a19Q9DAM5 318 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Tmem174Q9DCX7 243 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Adamts5Q9R001 930 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Diaph3Q9Z207 1171 aa12.82□□□□□ -0.36
Trim50-202ENSMUST00000111180 Lilra6A0A0B4J1F3 663 aa12.81□□□□□ -0.36
Trim50-202ENSMUST00000111180 Rpl9-ps6A0A140T8T4 192 aa12.81□□□□□ -0.36
Trim50-202ENSMUST00000111180 DgkiD3YWQ0 1071 aa12.81□□□□□ -0.36
Trim50-202ENSMUST00000111180 Vmn2r11E9Q4X4 861 aa12.81□□□□□ -0.36
Trim50-202ENSMUST00000111180 Foxn2E9Q7L6 429 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms