RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 R3hdm2Q80TM6 1044 aaKnown RBP16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Arel1Q8CHG5 823 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam151aQ8QZW3 608 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Wdr98Q8VC42 657 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Use1Q9CQ56 270 aa16.96■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Slit1Q80TR4 1531 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 C2cd2E9Q3C1 696 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ccdc7bE9Q9Y3 381 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rpl10aP53026 217 aaKnown RBP16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ncf4P97369 339 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 TraddQ3U0V2 310 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mrps31Q61733 384 aaKnown RBP16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Znf280cQ6P3Y5 742 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ubash3bQ8BGG7 638 aa16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nmd3Q99L48 503 aaKnown RBP16.96■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 PfasQ5SUR0 1337 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Clhc1Q5M6W3 596 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Wee2Q66JT0 555 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Srp68Q8BMA6 625 aaKnown RBP16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Klhl24Q8BRG6 600 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Spice1Q8C804 860 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mtg1Q8R2R6 326 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Fis1Q9CQ92 152 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Atp6v1c1Q9Z1G3 382 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 NhsB1AV60 1647 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Umodl1Q5DID3 1319 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Sptlc1O35704 473 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cpa3P15089 417 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Slc35g1Q8BY79 368 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Actr8Q8R2S9 624 aaKnown RBP16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 GzmnQ920S1 248 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tex13bQ99MW5 186 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Oma1Q9D8H7 521 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Gtf3c6Q9D8P7 227 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Msh5Q9QUM7 833 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ror1Q9Z139 937 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Bpifb9bA2AJD1 591 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rhbdl3P58873 404 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mup20Q5FW60 181 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Bpifb9aQ80XI7 591 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Zfp57Q8C6P8 421 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lrrc40Q9CRC8 602 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Msh3P13705 1091 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ube2e3P52483 207 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cox10Q8CFY5 443 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Prmt5Q8CIG8 637 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lin7aQ8JZS0 233 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mis18aQ9CZJ6 204 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Znf687Q9D2D7 1237 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Prkar1aQ9DBC7 381 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pramef6A2A8M8 474 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 rp9P97762 213 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lrrc75bQ7TPD7 306 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Socs4Q91ZA6 436 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ints11Q9CWS4 600 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rfc5Q9D0F6 339 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pdk4O70571 412 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 JundP15066 341 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Olfr301Q7TS04 311 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 OgtQ8CGY8 1046 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Erich5Q8K0S2 362 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pcdhga10Q91XY9 930 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ppp1r16aQ923M0 524 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Sept12Q9D451 317 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Olfr743L7N1Y2 311 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Q8BGC1 442 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ndufs1Q91VD9 727 aaKnown RBP16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lrrc71Q9D3W5 558 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tmem176aQ9DCS1 244 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 AadatQ9WVM8 425 aa16.95■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cdk16Q04735 496 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 NapepldQ8BH82 396 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 4931406P16RikQ8C5X1 1059 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Otud5Q3U2S4 566 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 DnerQ8JZM4 737 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 CalcbQ99MP3 130 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Map3k6Q9WTR2 1291 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Upf3aQ3ULJ3 422 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rexo4Q6PAQ4 432 aaKnown RBP16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mrpl9Q99N94 265 aaKnown RBP16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Smpd3Q9JJY3 655 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Defa8P50706 81 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Sel1l2Q3V172 688 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Magee2Q52KG3 523 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 SpidrQ8BGX7 933 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Catsper4Q8BVN3 442 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Plcl2Q8K394 1128 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pdcd10Q8VE70 212 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Kifc1Q9QWT9 674 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Arfgef2A2A5R2 1792 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Phc1Q64028 1012 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mettl16Q9CQG2 553 aaKnown RBP16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Dip2bQ3UH60 1574 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 PamP97467 979 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nr0b1Q61066 472 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Vcpip1Q8CDG3 1220 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lpar1P61793 364 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Slc2a13Q3UHK1 637 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mboat7Q8CHK3 473 aa16.94■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Spag16Q8K450 639 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms