RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Ccdc138Q0VF22 680 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tmem26Q3UP23 366 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nomo1Q6GQT9 1214 aaKnown RBP13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cd300lfQ6SJQ7 337 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 LppQ8BFW7 613 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Thnsl1Q8BH55 747 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Afap1l1Q8BZI0 768 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Hdac7Q8C2B3 938 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Mrps18aQ99N85 196 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nsmce3Q9CPR8 279 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Krt20Q9D312 431 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Rab27aQ9ERI2 221 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ccdc22Q9JIG7 627 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cyth1Q9QX11 398 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Capn7Q9R1S8 813 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 TfebQ9R210 475 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pex11bQ9Z210 259 aa13.08□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PiggD3Z3Y1 983 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Mroh4G3X8W1 983 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 NumblO08919 604 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Scg3P47867 471 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Acot8P58137 320 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Calb2Q08331 271 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Spryd7Q3TFQ1 196 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Aarsd1Q3THG9 412 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 E330034G19RikQ3UWX6 351 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tmem237Q3V0J1 427 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Esyt3Q5DTI8 891 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Xylt1Q811B1 953 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 EmsyQ8BMB0 1264 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Stx16Q8BVI5 326 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Trim14Q8BVW3 440 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Kcnv1Q8BZN2 503 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Atg16l1Q8C0J2 607 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Plekhh3Q8VCE9 796 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Slc25a3Q8VEM8 357 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Olfr30Q8VGD8 315 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dnajc3Q91YW3 504 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ndufa10Q99LC3 355 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cttnbp2nlQ99LJ0 638 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nsmce1Q9D720 266 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tmem68Q9D850 329 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Neu2Q9JMH3 379 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 ClcnkbQ9WUB6 687 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Wnt8bQ9WUD6 350 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 2310061I04RikB8JJ69 315 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Axin1O35625 863 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Rdh7O88451 316 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 EgfP01132 1217 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ccnb1P24860 430 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Glud1P26443 558 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Wnt3aP27467 352 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fam8a1Q3URQ4 399 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 TceancQ3US16 359 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Q5XFZ0 217 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Klra8Q60682 266 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tas2r109Q7M707 316 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ccnt2Q7TQK0 723 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pdk1Q8BFP9 434 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nipal1Q8BMW7 416 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Klhl38Q8BSF5 581 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Lig4Q8BTF7 911 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pacs1Q8K212 961 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Znf426Q8R1D1 550 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ubap2Q91VX2 1132 aaKnown RBP13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Unc45aQ99KD5 944 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Noxred1Q9D3S5 366 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Lrrc34Q9DAM1 415 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pgam1Q9DBJ1 254 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Map3k6Q9WTR2 1291 aa13.07□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ankrd16A2AS55 361 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nfx1B1AY10 1114 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 A930018M24RikB7ZMY3 218 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Zc3h7aE9PWW6 970 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 4930426L09RikE9Q0N7 123 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Serpini1O35684 410 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 AlplP09242 524 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ythdf1P59326 559 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gata5P97489 404 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pyroxd1Q3TMV7 498 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Otol1Q4ZJM7 482 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Wee2Q66JT0 555 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Jade1Q6ZPI0 834 aaKnown RBP13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Scara3Q8C850 606 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Nudcd3Q8R1N4 363 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fuca1Q99LJ1 452 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 VasnQ9CZT5 673 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Actrt2Q9D9L5 377 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Strn3Q9ERG2 796 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Wdr81Q5ND34 1934 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dennd5bA2RSQ0 1274 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sypl2O89104 264 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Grb10Q60760 621 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Sort1Q6PHU5 825 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Lrfn2Q80TG9 788 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dnajb13Q80Y75 316 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Slc7a4Q8BLQ7 635 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Man2a2Q8BRK9 1152 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ldlrap1Q8C142 308 aa13.06□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pde10aQ8CA95 790 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms