RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tmem115Q9WUH1 350 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 TfgQ9Z1A1 397 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 FaahO08914 579 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 UmpsP13439 481 aaKnown RBP13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gsta3P30115 221 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Bace1P56818 501 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 HmgcrQ01237 887 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Serpina6Q06770 397 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Bcar1Q61140 874 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Sp140Q6NSQ5 534 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Trub1Q8C0D0 338 aaKnown RBP13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Mtss1Q8R1S4 759 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Plbd1Q8VCI0 550 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ing3Q8VEK6 421 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pofut2Q8VHI3 429 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Prkag2Q91WG5 566 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Thg1lQ9CY52 298 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 S100pbpQ9D5K4 396 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PignQ9R1S3 931 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc2a5Q9WV38 501 aa13.07□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Srp72F8VQC1 671 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Utp14bQ6EJB6 756 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ubxn7Q6P5G6 467 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Syt15Q8C6N3 418 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lin7aQ8JZS0 233 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Otud7aQ8R554 926 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Smap1Q91VZ6 440 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Creld1Q91XD7 420 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Haus8Q99L00 373 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 CoprsQ9CQ13 173 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tma16Q9CR02 221 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Snx5Q9D8U8 404 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Vwa7Q9JHA8 891 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cntnap5cQ0V8T7 1305 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rrn3B2RS91 656 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rps6ka3P18654 740 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 ZfaP23607 742 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zdhhc18Q5Y5T2 380 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nqo1Q64669 274 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Mrgprb8Q7TN51 330 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lrrc8dQ8BGR2 859 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 B4galt5Q9JMK0 388 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Aqp5Q9WTY4 265 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Trpc7Q9WVC5 862 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tatdn2B7ZNL9 783 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 ChkaO54804 453 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tlx1P43345 332 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Usp46P62069 366 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Neurl1bQ0MW30 546 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pdss1Q33DR2 409 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Znf512Q69Z99 562 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Prpf38bQ80SY5 542 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Fnip2Q80TD3 1108 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Q8BGA7 448 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kct2Q8K201 259 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Snrnp25Q8VIK1 123 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Unc45aQ99KD5 944 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Akr1e2Q9DCT1 301 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Med20Q9R0X0 212 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Dctn3Q9Z0Y1 186 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Dpy19l4A2AJQ3 722 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm2832F7AEC7 200 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Glb1P23780 647 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PrkcqQ02111 707 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Q3UTZ3 580 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Proser1Q5PRE5 913 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Itm2aQ61500 263 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 UstQ8BUB6 407 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lca5lQ8C0X0 741 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc35f5Q8R314 524 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Trmt10bQ9D075 318 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Q9D4A5 307 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PllpQ9DCU2 182 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rdh14Q9ERI6 334 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Chrac1Q9JKP8 129 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Actl7bQ9QY83 418 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Arid3bQ9Z1N7 568 aa13.06□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nup188Q6ZQH8 1759 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Olfr292F8VQ84 308 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Il3P01586 166 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pcyt1aP49586 367 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Abce1P61222 599 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gpd1lQ3ULJ0 351 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Sema5bQ60519 1093 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 XiapQ60989 496 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Armcx2Q6A058 784 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Serpina3bQ8BYY9 420 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Lmo3Q8BZL8 145 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Olfr809Q8VEX8 328 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 HnrnprQ8VHM5 632 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pcdha11Q91Y19 950 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Slc12a4Q9JIS8 1085 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 CitP49025 2055 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ubr3Q5U430 1889 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ckmt1P30275 418 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Sult1e1P49891 295 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rcsd1Q3UZA1 412 aa13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Eif2dQ61211 570 aaKnown RBP13.05□□□□□ -0.32
Clcn3-201ENSMUST00000004430 LbpQ61805 481 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms