RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Disc1Q811T9 852 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tmem154Q8C4Q9 181 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Uba3Q8C878 462 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zdhhc3Q8R173 299 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cyp4a12aQ91WL5 508 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Snapc2Q91XA5 359 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pla2g12bQ99P27 195 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam187aQ9D3R5 417 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Snx29Q9D3S3 818 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Efcab12V9GXH0 673 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Atp9aO70228 1047 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ncam1P13595 1115 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ptpn5P54830 541 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tlr8P58682 1032 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Aqp1Q02013 269 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mrgprx2Q3UG50 352 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Nat9Q3UG98 241 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Dpysl3Q62188 570 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rxfp1Q6R6I7 758 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mfn1Q811U4 741 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fbxl13Q8CDU4 790 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Smtnl2Q8CI12 456 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ttc8Q8VD72 515 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vmp1Q99KU0 406 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PyglQ9ET01 850 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Irx5Q9JKQ4 484 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gyg1Q9R062 333 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Mzf1S4R1L6 814 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cfap65Q3V0B4 1847 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MrasO08989 208 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 AmacrO09174 381 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ces1cP23953 554 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Btbd3P58545 530 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 YwhaqP68254 245 aaKnown RBP9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zfp560Q3URI6 754 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Trim67Q505D9 768 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RhocQ62159 193 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 MregQ6NVG5 214 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Q8BGC1 442 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hus1Q8BQY8 280 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Akr1c20Q8VC77 323 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sgf29Q9DA08 293 aaKnown RBP9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tbx20Q9ES03 445 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Scgb2b7D3YYY1 112 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 2610008E11RikG3X964 669 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cd151O35566 253 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Magea5O89009 320 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Magea8O89012 320 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fgl2P12804 432 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RxraP28700 467 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Vars2Q3U2A8 1060 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 XiapQ60989 496 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Magea3Q6T340 320 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 SugctQ7TNE1 436 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RragdQ7TT45 449 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam83aQ8K2P2 436 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rnf219Q8K2Y0 722 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sh3glb2Q8R3V5 400 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pcdhb6Q91XZ4 772 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Erp27Q9D8U3 272 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Efhd2Q9D8Y0 240 aaKnown RBP9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Smpd3Q9JJY3 655 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Git2Q9JLQ2 708 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 RhoaQ9QUI0 193 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 CluhQ5SW19 1315 aa9.37□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Zbed5B2RPU8 756 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 NuggcD3YWJ0 796 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Xirp1O70373 1129 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Srpk1O70551 648 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Cap1P40124 474 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 B3gat3P58158 335 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rpl22P67984 128 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Eif2ak2Q03963 515 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Myl12bQ3THE2 172 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 D630036H23RikQ3UQD6 204 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sel1l2Q3V172 688 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PostnQ62009 838 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Chst10Q6PGK7 356 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pip5kl1Q6U7H8 395 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gpt2Q8BGT5 522 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sox30Q8CGW4 782 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 D630039A03RikQ8K0M7 236 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Tspan8Q8R3G9 235 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Fam20bQ8VCS3 409 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ubiad1Q9DC60 336 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 PaicsQ9DCL9 425 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Sae1Q9R1T2 350 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Stk16O88697 305 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Defa8P50706 81 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Hpcal1P62748 193 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Lpcat1Q3TFD2 534 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 LcorlQ3U285 600 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Pdap1Q3UHX2 181 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Ccdc61Q3UJV1 511 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Brd9Q3UQU0 596 aaKnown RBP9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Plcl1Q3USB7 1096 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Gm5431Q5NCB3 844 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Znf496Q5SXI5 585 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Maml1Q6T264 1020 aa9.36□□□□□ -0.91
Ccdc47-201ENSMUST00000002043 Rsbn1Q80T69 795 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms