RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-222ENST00000642141 LYSMD4Q5XG99 296 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 PSAPL1Q6NUJ1 521 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 ZNF366Q8N895 744 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 GOLGA1Q92805 767 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 FAM149B1Q96BN6 582 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
SCN1A-222ENST00000642141 MKRN2Q9H000 416 aaKnown RBP10.73□□□□□ -0.69
SCN1A-222ENST00000642141 CD248Q9HCU0 757 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 ELOVL2Q9NXB9 296 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 RWDD2AQ9UIY3 292 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 NAALADL1Q9UQQ1 740 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 SLC27A6Q9Y2P4 619 aa10.73□□□□□ -0.69
SCN1A-222ENST00000642141 MYO18AQ92614 2054 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 CDX4O14627 284 aaPredicted RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 SYNCRIPO60506 623 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TBL1XO60907 577 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 NDUFS2O75306 463 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 FGFR1OPO95684 399 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 FYNP06241 537 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 PRKCHP24723 683 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 MAOBP27338 520 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 HLA-FP30511 346 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 SLC6A4P31645 630 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 GPD2P43304 727 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 MTIF2P46199 727 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 LIMK1P53667 647 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 MARSP56192 900 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TBX4P57082 545 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 GCNT1Q02742 428 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 ARID5AQ03989 594 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 ZNF234Q14588 700 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 STARD3Q14849 445 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TPD52L1Q16890 204 aaPredicted RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 SYPL2Q5VXT5 272 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 SERPINA13PQ6UXR4 307 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 ANKS1BQ7Z6G8 1248 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 FAM124AQ86V42 546 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 IRF2BP1Q8IU81 584 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 SYT12Q8IV01 421 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 CFAP52Q8N1V2 620 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 CPXM2Q8N436 756 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TRIML1Q8N9V2 468 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 OR2I1PQ8NGU4 316 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 MYEOVQ96EZ4 313 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 HSPA12BQ96MM6 686 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 GTPBP2Q9BX10 602 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 LSM14BQ9BX40 385 aaKnown RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 PRDM16Q9HAZ2 1276 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TMEM9BQ9NQ34 198 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 ABCB8Q9NUT2 735 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 CHMP5Q9NZZ3 219 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 THAP10Q9P2Z0 257 aaPredicted RBP10.72□□□□□ -0.69
SCN1A-222ENST00000642141 TJP2Q9UDY2 1190 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 CYTH4Q9UIA0 394 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 PILRBQ9UKJ0 227 aa10.72□□□□□ -0.69
SCN1A-222ENST00000642141 KCNJ18B7U540 433 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 AP5Z1O43299 807 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 KCNK5O95279 499 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 MOCS2O96007 188 aaPredicted RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 EPHX1P07099 455 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 ADRB1P08588 477 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 PNMA6AP0CW24 399 aaPredicted RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 SLC11A2P49281 568 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 ZNF33AQ06730 810 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 STILQ15468 1287 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 TAF5Q15542 800 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 FNDC3BQ53EP0 1204 aaKnown RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 MSANTD2Q6P1R3 559 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 TRIM65Q6PJ69 517 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 FOXR2Q6PJQ5 311 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 SLC36A4Q6YBV0 504 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 GBP6Q6ZN66 633 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 CHST9Q7L1S5 443 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 TMPRSS6Q8IU80 811 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 SLC41A1Q8IVJ1 513 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 FAM217AQ8IXS0 508 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 RGL4Q8IZJ4 473 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 WFDC5Q8TCV5 224 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 UCMAQ8WVF2 138 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 ZNF606Q8WXB4 792 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 IRGQQ8WZA9 623 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 TOE1Q96GM8 510 aaKnown RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 HSFY1Q96LI6 401 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 GPR174Q9BXC1 333 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 NUSAP1Q9BXS6 441 aaKnown RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 MTG2Q9H4K7 406 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 XPO7Q9UIA9 1087 aaKnown RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 AJAP1Q9UKB5 411 aaPredicted RBP10.71□□□□□ -0.69
SCN1A-222ENST00000642141 CNTN6Q9UQ52 1028 aa10.71□□□□□ -0.69
SCN1A-222ENST00000642141 SYNJ2BP-COX16A0A087WUM0 186 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 BECN2A8MW95 431 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 E5RJQ4 531 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 GFRA2O00451 464 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 CAPN9O14815 690 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 PAPSS1O43252 624 aaPredicted RBP10.7□□□□□ -0.7
SCN1A-222ENST00000642141 MED7O43513 233 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 ACSL4O60488 711 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 ZNF217O75362 1048 aa10.7□□□□□ -0.7
SCN1A-222ENST00000642141 GRAP2O75791 330 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms