RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SSR1P43307 286 aaKnown RBP12.78□□□□□ -0.36
LINC00339-213ENST00000642137 MLLT6P55198 1093 aaPredicted RBP12.78□□□□□ -0.36
LINC00339-213ENST00000642137 TAS2R40P59535 323 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 SLC25A11Q02978 314 aaKnown RBP12.78□□□□□ -0.36
LINC00339-213ENST00000642137 ZNF77Q15935 545 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 AAK1Q2M2I8 961 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 MTSS1LQ765P7 747 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 RHOT1Q8IXI2 618 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 SH3RF2Q8TEC5 729 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 CD101Q93033 1021 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 C1orf74Q96LT6 269 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
LINC00339-213ENST00000642137 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 CFAP97Q9P2B7 532 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 STOML2Q9UJZ1 356 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
LINC00339-213ENST00000642137 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 MIF4GDA9UHW6 222 aaKnown RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 ECI2O75521 394 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 PRAMEF12O95522 483 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 KLKB1P03952 638 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 RARAP10276 462 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 IRF1P10914 325 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 TCF4P15884 667 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CTNNA2P26232 953 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 IL1R2P27930 398 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CORO1AP31146 461 aaKnown RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 SLC11A2P49281 568 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 SCAPQ12770 1279 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 USP4Q13107 963 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 ZNF569Q5MCW4 686 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 MEI1Q5TIA1 1274 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 DAB2IPQ5VWQ8 1189 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 Q6ZNB5 142 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CYP4V2Q6ZWL3 525 aaPredicted RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CPNE8Q86YQ8 564 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 DENND1CQ8IV53 801 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 MFSD6LQ8IWD5 586 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 ZDHHC14Q8IZN3 488 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CCDC185Q8N715 623 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 WBP2Q969T9 261 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 NXPE3Q969Y0 559 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 PEBP4Q96S96 227 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 DDX50Q9BQ39 737 aaKnown RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 GOLPH3Q9H4A6 298 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 PRDM6Q9NQX0 595 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 TBC1D14Q9P2M4 693 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 AGO1Q9UL18 857 aaKnown RBP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00339-213ENST00000642137 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 PCDHA3Q9Y5H8 950 aa12.77□□□□□ -0.37
LINC00339-213ENST00000642137 CCDC66A2RUB6 948 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 I6L893 689 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 SLC9A3R1O14745 358 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 PAGE1O75459 146 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 TUBB4AP04350 444 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 FCARP24071 287 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 CHKAP35790 457 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 VIPR2P41587 438 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 TFF2Q03403 129 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 ATP13A4Q4VNC1 1196 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 EFHC2Q5JST6 749 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 ADGRF1Q5T601 910 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 SLC35F6Q8N357 371 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 TDRD5Q8NAT2 981 aaKnown RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 RSPRY1Q96DX4 576 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 HES6Q96HZ4 224 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 LRRC3BQ96PB8 259 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 SNRNP25Q9BV90 132 aaKnown RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 ZWILCHQ9H900 591 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 THG1LQ9NWX6 298 aaKnown RBP12.76□□□□□ -0.37
LINC00339-213ENST00000642137 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 AP4E1Q9UPM8 1137 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 JRKLQ9Y4A0 524 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 HS3ST4Q9Y661 456 aa12.76□□□□□ -0.37
LINC00339-213ENST00000642137 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 FTCDO95954 541 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 MOCS2O96007 188 aaPredicted RBP12.75□□□□□ -0.37
LINC00339-213ENST00000642137 IL9P15248 144 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 L1CAMP32004 1257 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 PEX5P50542 639 aa12.75□□□□□ -0.37
LINC00339-213ENST00000642137 ZNF135P52742 658 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms